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CAZyme Information: MGYG000002324_00319
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Ligilactobacillus salivarius | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Ligilactobacillus; Ligilactobacillus salivarius | |||||||||||
| CAZyme ID | MGYG000002324_00319 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 318874; End: 323202 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| TIGR01760 | tape_meas_TP901 | 2.57e-45 | 271 | 632 | 1 | 350 | phage tail tape measure protein, TP901 family, core region. This model represents a reasonably well conserved core region of a family of phage tail proteins. The member from phage TP901-1 was characterized as a tail length tape measure protein in that a shortened form of the protein leads to phage with proportionately shorter tails. [Mobile and extrachromosomal element functions, Prophage functions] |
| pfam10145 | PhageMin_Tail | 2.10e-39 | 317 | 529 | 1 | 200 | Phage-related minor tail protein. Members of this family are found in putative phage tail tape measure proteins. |
| COG5283 | COG5283 | 1.14e-23 | 13 | 610 | 26 | 511 | Phage-related tail protein [Mobilome: prophages, transposons]. |
| COG3953 | SLT | 6.71e-13 | 1238 | 1366 | 9 | 155 | SLT domain protein [Mobilome: prophages, transposons]. |
| cd13925 | RPF | 3.91e-11 | 1245 | 1319 | 1 | 71 | core lysozyme-like domain of resuscitation-promoting factor proteins. Resuscitation-promoting factor (RPF) proteins, found in various (G+C)-rich Gram-positive bacteria, act to reactivate cultures from stationary phase. This protein shares elements of the structural core of lysozyme and related proteins. Furthermore, it shares a conserved active site glutamate which is required for activity, and has a polysaccharide binding cleft that corresponds to the peptidoglycan binding cleft of lysozyme. Muralytic activity of Rpf in Micrococcus luteus correlates with resuscitation, supporting a mechanism dependent on cleavage of peptidoglycan by RPF. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AKI03852.1 | 0.0 | 1 | 1442 | 1 | 1442 |
| AUX11477.1 | 1.73e-297 | 2 | 1383 | 3 | 1338 |
| BBE26715.1 | 1.82e-293 | 2 | 1383 | 3 | 1338 |
| AJA81595.1 | 2.85e-134 | 9 | 1401 | 7 | 1608 |
| QOX67317.1 | 3.63e-128 | 9 | 1401 | 7 | 1607 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| E7DNB6 | 6.87e-22 | 231 | 707 | 21 | 473 | Tape measure protein OS=Pneumococcus phage Dp-1 OX=59241 GN=TMP PE=4 SV=1 |
| P45931 | 2.65e-12 | 1227 | 1386 | 1343 | 1516 | Uncharacterized protein YqbO OS=Bacillus subtilis (strain 168) OX=224308 GN=yqbO PE=1 SV=2 |
| P54334 | 3.28e-10 | 1228 | 1386 | 1092 | 1264 | Phage-like element PBSX protein XkdO OS=Bacillus subtilis (strain 168) OX=224308 GN=xkdO PE=4 SV=2 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000046 | 0.000002 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
