You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002325_00588
You are here: Home > Sequence: MGYG000002325_00588
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Listeria monocytogenes_B | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Lactobacillales; Listeriaceae; Listeria; Listeria monocytogenes_B | |||||||||||
| CAZyme ID | MGYG000002325_00588 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | putative endopeptidase p60 | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 619557; End: 620990 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK13914 | PRK13914 | 0.0 | 1 | 477 | 3 | 481 | invasion associated endopeptidase. |
| pfam00877 | NLPC_P60 | 2.11e-48 | 374 | 476 | 1 | 105 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| COG0791 | Spr | 1.44e-30 | 365 | 474 | 78 | 196 | Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis]. |
| COG3103 | YgiM | 1.06e-24 | 72 | 199 | 19 | 151 | Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]. |
| NF033742 | NlpC_p60_RipB | 3.09e-24 | 365 | 458 | 80 | 185 | NlpC/P60 family peptidoglycan endopeptidase RipB. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QOF57374.1 | 1.21e-253 | 1 | 477 | 1 | 477 |
| AMD23639.2 | 1.21e-253 | 1 | 477 | 1 | 477 |
| QOF65136.1 | 1.21e-253 | 1 | 477 | 1 | 477 |
| AKI45760.1 | 1.21e-253 | 1 | 477 | 1 | 477 |
| AMD26522.2 | 1.21e-253 | 1 | 477 | 1 | 477 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4HPE_A | 1.83e-23 | 368 | 477 | 193 | 306 | ChainA, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_B Chain B, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_C Chain C, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_D Chain D, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_E Chain E, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_F Chain F, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630] |
| 7CFL_A | 2.80e-21 | 365 | 477 | 17 | 137 | ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile] |
| 6B8C_A | 3.38e-17 | 365 | 456 | 31 | 123 | Crystalstructure of NlpC/p60 domain of peptidoglycan hydrolase SagA [Enterococcus faecium] |
| 3I86_A | 3.26e-16 | 365 | 458 | 15 | 120 | Crystalstructure of the P60 Domain from M. avium subspecies paratuberculosis antigen MAP1204 [Mycobacterium avium subsp. paratuberculosis],3I86_B Crystal structure of the P60 Domain from M. avium subspecies paratuberculosis antigen MAP1204 [Mycobacterium avium subsp. paratuberculosis] |
| 3PBC_A | 3.52e-16 | 365 | 458 | 88 | 193 | ChainA, Invasion Protein [Mycobacterium tuberculosis] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P21171 | 4.82e-237 | 1 | 477 | 3 | 484 | Probable endopeptidase p60 OS=Listeria monocytogenes serovar 1/2a (strain ATCC BAA-679 / EGD-e) OX=169963 GN=iap PE=1 SV=2 |
| Q01836 | 1.76e-187 | 1 | 477 | 3 | 467 | Probable endopeptidase p60 OS=Listeria innocua serovar 6a (strain ATCC BAA-680 / CLIP 11262) OX=272626 GN=iap PE=3 SV=2 |
| Q01837 | 4.77e-174 | 1 | 477 | 3 | 524 | Probable endopeptidase p60 OS=Listeria ivanovii OX=1638 GN=iap PE=3 SV=1 |
| Q01839 | 5.09e-171 | 1 | 477 | 3 | 524 | Probable endopeptidase p60 OS=Listeria welshimeri OX=1643 GN=iap PE=3 SV=1 |
| Q01838 | 1.92e-160 | 1 | 477 | 3 | 523 | Probable endopeptidase p60 OS=Listeria seeligeri OX=1640 GN=iap PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000238 | 0.999065 | 0.000168 | 0.000188 | 0.000170 | 0.000148 |
