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CAZyme Information: MGYG000002334_01617

You are here: Home > Sequence: MGYG000002334_01617

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium thermophilum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium thermophilum
CAZyme ID MGYG000002334_01617
CAZy Family GH18
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
430 MGYG000002334_1|CGC20 46882.19 4.595
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002334 2291643 Isolate not provided not provided
Gene Location Start: 2061250;  End: 2062542  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002334_01617.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH18 70 332 7.7e-16 0.8648648648648649

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd06543 GH18_PF-ChiA-like 5.30e-90 49 355 1 294
PF-ChiA is an uncharacterized chitinase found in the hyperthermophilic archaeon Pyrococcus furiosus with a glycosyl hydrolase family 18 (GH18) catalytic domain as well as a cellulose-binding domain. Members of this domain family are found not only in archaea but also in eukaryotes and prokaryotes. PF-ChiA exhibits hydrolytic activity toward both colloidal and crystalline (beta/alpha) chitins at high temperature.
cd12215 ChiC_BD 1.52e-04 382 426 2 42
Chitin-binding domain of chitinase C. Chitin-binding domain of chitinase C (ChiC) of Streptomyces griseus and related proteins. Chitinase C is a family 19 chitinase, and consists of a N-terminal chitin binding domain and a C-terminal chitin-catalytic domain that effects degradation. Chitinases function in invertebrates in the degradation of old exoskeletons, in fungi to utilize chitin in cell walls, and in bacteria which use chitin as an energy source. ChiC contains the characteristic chitin-binding aromatic residues.
cd00598 GH18_chitinase-like 0.001 51 238 2 180
The GH18 (glycosyl hydrolase, family 18) type II chitinases hydrolyze chitin, an abundant polymer of beta-1,4-linked N-acetylglucosamine (GlcNAc) which is a major component of the cell wall of fungi and the exoskeleton of arthropods. Chitinases have been identified in viruses, bacteria, fungi, protozoan parasites, insects, and plants. The structure of the GH18 domain is an eight-stranded beta/alpha barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. The GH18 family includes chitotriosidase, chitobiase, hevamine, zymocin-alpha, narbonin, SI-CLP (stabilin-1 interacting chitinase-like protein), IDGF (imaginal disc growth factor), CFLE (cortical fragment-lytic enzyme) spore hydrolase, the type III and type V plant chitinases, the endo-beta-N-acetylglucosaminidases, and the chitolectins. The GH85 (glycosyl hydrolase, family 85) ENGases (endo-beta-N-acetylglucosaminidases) are closely related to the GH18 chitinases and are included in this alignment model.
cd02871 GH18_chitinase_D-like 0.002 50 188 10 145
GH18 domain of Chitinase D (ChiD). ChiD, a chitinase found in Bacillus circulans, hydrolyzes the 1,4-beta-linkages of N-acetylglucosamine in chitin and chitodextrins. The domain architecture of ChiD includes a catalytic glycosyl hydrolase family 18 (GH18) domain, a chitin-binding domain, and a fibronectin type III domain. The chitin-binding and fibronectin type III domains are located either N-terminal or C-terminal to the catalytic domain. This family includes exochitinase Chi36 from Bacillus cereus.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AGH41937.1 3.88e-316 1 430 1 430
AUD88803.1 5.61e-204 5 429 2 434
QTL82600.1 1.13e-203 5 429 2 434
AUE20308.1 2.28e-203 5 429 2 434
AUD84704.1 2.28e-203 5 429 2 434

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2DSK_A 4.66e-21 43 324 4 263
Crystalstructure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus [Pyrococcus furiosus],2DSK_B Crystal structure of catalytic domain of hyperthermophilic chitinase from Pyrococcus furiosus [Pyrococcus furiosus]
3A4W_A 2.18e-20 43 324 4 263
Crystalstructures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus],3A4W_B Crystal structures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus]
3A4X_A 5.49e-20 43 324 4 263
Crystalstructures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus],3A4X_B Crystal structures of catalytic site mutants of active domain 2 of thermostable chitinase from Pyrococcus furiosus complexed with chito-oligosaccharides [Pyrococcus furiosus],3AFB_A Crystal structures of catalytic site mutants of active domain 2 of chitinase from Pyrococcus furiosus [Pyrococcus furiosus],3AFB_B Crystal structures of catalytic site mutants of active domain 2 of chitinase from Pyrococcus furiosus [Pyrococcus furiosus]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P13656 5.44e-28 74 330 613 869
Probable bifunctional chitinase/lysozyme OS=Escherichia coli (strain K12) OX=83333 GN=chiA PE=1 SV=2
O74199 1.37e-24 74 324 262 509
Endochitinase 11 OS=Metarhizium anisopliae OX=5530 GN=chi11 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.985911 0.005580 0.000395 0.000066 0.000028 0.008039

TMHMM  Annotations      download full data without filtering help

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13 35