dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002346_03076

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Basic Information help

Species

Acinetobacter pittii

Lineage

Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter; Acinetobacter pittii

CAZyme ID

MGYG000002346_03076

CAZy Family

AA6

CAZyme Description

NAD(P)H dehydrogenase (quinone)

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
200	MGYG000002346_57\|CGC1	21496.75	7.092

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002346	3962855	Isolate	United States	North America

Gene Location

Start: 4211; End: 4813 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000002346_03076.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
AA6	8	197	1.4e-69	0.9897435897435898

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
PRK03767	PRK03767	2.05e-61	8	198	4	198	NAD(P)H:quinone oxidoreductase; Provisional
TIGR01755	flav_wrbA	1.44e-50	8	198	3	197	NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR (SP:P03032) are not detected. [Energy metabolism, Electron transport]
COG0655	WrbA	1.10e-42	1	198	1	205	Multimeric flavodoxin WrbA [Energy production and conversion].
COG0426	NorV	1.75e-09	7	127	248	346	Flavorubredoxin [Energy production and conversion].
pfam03358	FMN_red	1.76e-08	8	144	3	140	NADPH-dependent FMN reductase.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
CAD7285530.1	4.71e-105	22	187	1	166
CAD7238093.1	7.25e-58	22	198	1	177
BAM82206.1	1.11e-38	4	198	1	200
ABD62982.1	2.43e-37	8	198	4	199
ANB15094.1	5.13e-34	8	198	6	201

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
1ZWK_A	9.03e-81	6	198	13	205	Structureof WrbA from Pseudomonas aeruginosa [Pseudomonas aeruginosa],1ZWK_B Structure of WrbA from Pseudomonas aeruginosa [Pseudomonas aeruginosa],1ZWL_A Structure of WrbA from Pseudomonas aeruginosa in complex with FMN [Pseudomonas aeruginosa]
2A5L_A	3.18e-77	6	198	6	198	Thecrystal structure of the Trp repressor binding protein WrbA from Pseudomonas aeruginosa [Pseudomonas aeruginosa],2A5L_B The crystal structure of the Trp repressor binding protein WrbA from Pseudomonas aeruginosa [Pseudomonas aeruginosa]
2ZKI_A	3.22e-44	5	196	4	192	Crystalstructure of hypothetical Trp repressor binding protein from Sul folobus tokodaii (ST0872) [Sulfurisphaera tokodaii],2ZKI_B Crystal structure of hypothetical Trp repressor binding protein from Sul folobus tokodaii (ST0872) [Sulfurisphaera tokodaii],2ZKI_C Crystal structure of hypothetical Trp repressor binding protein from Sul folobus tokodaii (ST0872) [Sulfurisphaera tokodaii],2ZKI_D Crystal structure of hypothetical Trp repressor binding protein from Sul folobus tokodaii (ST0872) [Sulfurisphaera tokodaii],2ZKI_E Crystal structure of hypothetical Trp repressor binding protein from Sul folobus tokodaii (ST0872) [Sulfurisphaera tokodaii],2ZKI_F Crystal structure of hypothetical Trp repressor binding protein from Sul folobus tokodaii (ST0872) [Sulfurisphaera tokodaii],2ZKI_G Crystal structure of hypothetical Trp repressor binding protein from Sul folobus tokodaii (ST0872) [Sulfurisphaera tokodaii],2ZKI_H Crystal structure of hypothetical Trp repressor binding protein from Sul folobus tokodaii (ST0872) [Sulfurisphaera tokodaii]
4LA4_A	2.93e-41	8	198	5	203	Crystalstructure of native PnpB [Pseudomonas sp. WBC-3],4LA4_B Crystal structure of native PnpB [Pseudomonas sp. WBC-3],4LAF_A Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_B Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_C Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_D Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3]
4DY4_A	6.34e-35	8	198	3	195	Highresolution structure of E.coli WrbA with FMN [Escherichia coli APEC O1],4DY4_C High resolution structure of E.coli WrbA with FMN [Escherichia coli APEC O1]

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
Q9I509	3.67e-80	6	198	4	196	NAD(P)H dehydrogenase (quinone) OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=PA0949 PE=1 SV=1
Q0A961	5.00e-51	8	198	4	197	NAD(P)H dehydrogenase (quinone) OS=Alkalilimnicola ehrlichii (strain ATCC BAA-1101 / DSM 17681 / MLHE-1) OX=187272 GN=Mlg_1277 PE=3 SV=1
Q39LI8	1.99e-45	8	198	4	198	NAD(P)H dehydrogenase (quinone) OS=Burkholderia lata (strain ATCC 17760 / DSM 23089 / LMG 22485 / NCIMB 9086 / R18194 / 383) OX=482957 GN=Bcep18194_C7634 PE=3 SV=1
B9JEB9	2.74e-45	8	199	4	198	NAD(P)H dehydrogenase (quinone) OS=Agrobacterium radiobacter (strain K84 / ATCC BAA-868) OX=311403 GN=Arad_2057 PE=3 SV=1
A5G020	1.10e-44	8	198	4	197	NAD(P)H dehydrogenase (quinone) OS=Acidiphilium cryptum (strain JF-5) OX=349163 GN=Acry_2002 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000049	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000002346_03076.