logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002360_01363

You are here: Home > Sequence: MGYG000002360_01363

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lactobacillus hominis
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus; Lactobacillus hominis
CAZyme ID MGYG000002360_01363
CAZy Family GH170
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
363 MGYG000002360_8|CGC1 41772.58 6.6381
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002360 1926186 Isolate France Europe
Gene Location Start: 48060;  End: 49151  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002360_01363.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH170 6 360 1.2e-110 0.9914285714285714

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3589 COG3589 4.62e-121 3 360 1 356
Uncharacterized protein [Function unknown].
pfam19200 DUF871_N 7.91e-120 6 240 1 234
DUF871 N-terminal domain. This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.
pfam05913 DUF871 5.35e-48 247 360 1 115
Bacterial protein of unknown function (DUF871). This family consists of several conserved hypothetical proteins from bacteria and archaea. The function of this family is unknown.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBD49425.1 3.46e-244 1 362 1 362
QHC54009.1 6.97e-244 1 362 1 362
ABJ61127.1 6.97e-244 1 363 1 363
QTP21471.1 6.97e-244 1 362 1 362
ART98319.1 6.97e-244 1 362 1 362

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1X7F_A 1.82e-125 4 358 27 381
Crystalstructure of an uncharacterized B. cereus protein [Bacillus cereus ATCC 14579]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000047 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002360_01363.