You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002370_02557
You are here: Home > Sequence: MGYG000002370_02557
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Clostridioides difficile_A | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile_A | |||||||||||
| CAZyme ID | MGYG000002370_02557 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 6639; End: 7310 Strand: - | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK11198 | PRK11198 | 3.23e-10 | 161 | 221 | 89 | 146 | LysM domain/BON superfamily protein; Provisional |
| COG1652 | XkdP | 9.29e-10 | 134 | 223 | 177 | 264 | Nucleoid-associated protein YgaU, contains BON and LysM domains [Function unknown]. |
| cd00118 | LysM | 8.91e-08 | 168 | 220 | 1 | 45 | Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes. |
| NF033163 | lipo_LipL71 | 5.91e-06 | 141 | 223 | 369 | 462 | lipoprotein LipL71. Members of this family are lipoprotein LipL71, also known as LruA, as described in Leptospira interrogans but found broadly in the genus Leptospira. Close homologs that are not lipoproteins by sequence are likely defective in their reported coding region. |
| smart00257 | LysM | 2.52e-05 | 169 | 220 | 1 | 44 | Lysin motif. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AXU27046.1 | 7.12e-151 | 1 | 223 | 1 | 223 |
| AXU74663.1 | 1.01e-150 | 1 | 223 | 1 | 223 |
| AXU36307.1 | 4.80e-149 | 1 | 223 | 1 | 223 |
| AXU32519.1 | 4.80e-149 | 1 | 223 | 1 | 223 |
| AXU28723.1 | 4.80e-149 | 1 | 223 | 1 | 223 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P54335 | 5.91e-22 | 2 | 221 | 5 | 218 | Phage-like element PBSX protein XkdP OS=Bacillus subtilis (strain 168) OX=224308 GN=xkdP PE=4 SV=2 |
| P45932 | 1.62e-21 | 2 | 221 | 5 | 218 | Uncharacterized protein YqbP OS=Bacillus subtilis (strain 168) OX=224308 GN=yqbP PE=4 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000067 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |