Species | Clostridioides difficile_A | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Clostridioides; Clostridioides difficile_A | |||||||||||
CAZyme ID | MGYG000002370_03612 | |||||||||||
CAZy Family | CBM50 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 9296; End: 9940 Strand: - |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
PRK11198 | PRK11198 | 8.65e-15 | 166 | 214 | 98 | 146 | LysM domain/BON superfamily protein; Provisional |
COG1652 | XkdP | 3.56e-14 | 158 | 214 | 205 | 262 | Nucleoid-associated protein YgaU, contains BON and LysM domains [Function unknown]. |
NF033163 | lipo_LipL71 | 6.24e-10 | 135 | 214 | 382 | 460 | lipoprotein LipL71. Members of this family are lipoprotein LipL71, also known as LruA, as described in Leptospira interrogans but found broadly in the genus Leptospira. Close homologs that are not lipoproteins by sequence are likely defective in their reported coding region. |
cd00118 | LysM | 6.95e-10 | 164 | 213 | 1 | 45 | Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes. |
smart00257 | LysM | 5.27e-07 | 165 | 213 | 1 | 44 | Lysin motif. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AXU34700.1 | 4.70e-144 | 1 | 214 | 1 | 211 |
AXU30912.1 | 4.70e-144 | 1 | 214 | 1 | 211 |
CDS84765.1 | 2.72e-143 | 1 | 214 | 1 | 211 |
QPL00283.1 | 4.63e-135 | 1 | 214 | 1 | 211 |
AWH82154.1 | 4.63e-135 | 1 | 214 | 1 | 211 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5FIM_A | 3.06e-08 | 168 | 214 | 101 | 147 | Thestructure of Kbp.K from E. coli [Escherichia coli],7PVC_A Chain A, Potassium binding protein Kbp [Escherichia coli K-12] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P54335 | 8.70e-35 | 2 | 196 | 7 | 191 | Phage-like element PBSX protein XkdP OS=Bacillus subtilis (strain 168) OX=224308 GN=xkdP PE=4 SV=2 |
P45932 | 3.44e-34 | 2 | 197 | 7 | 192 | Uncharacterized protein YqbP OS=Bacillus subtilis (strain 168) OX=224308 GN=yqbP PE=4 SV=1 |
P0ADE6 | 1.47e-07 | 168 | 214 | 101 | 147 | Potassium binding protein Kbp OS=Escherichia coli (strain K12) OX=83333 GN=kbp PE=1 SV=2 |
P0ADE7 | 1.47e-07 | 168 | 214 | 101 | 147 | Potassium binding protein Kbp OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=kbp PE=3 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.999923 | 0.000076 | 0.000029 | 0.000000 | 0.000000 | 0.000006 |
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