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CAZyme Information: MGYG000002373_01427

You are here: Home > Sequence: MGYG000002373_01427

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Clostridium septicum
Lineage Bacteria; Firmicutes_A; Clostridia; Clostridiales; Clostridiaceae; Clostridium; Clostridium septicum
CAZyme ID MGYG000002373_01427
CAZy Family GH84
CAZyme Description Hyaluronoglucosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1887 MGYG000002373_14|CGC2 209908.35 4.5143
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002373 3298966 Isolate France Europe
Gene Location Start: 30503;  End: 36166  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.35 3.2.1.52

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH84 188 500 2e-101 0.9864406779661017
CBM32 819 935 4.9e-16 0.8709677419354839

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07555 NAGidase 9.78e-119 188 501 1 293
beta-N-acetylglucosaminidase. This family has previously been described as a hyaluronidase. However, more recently it has been shown that this family has beta-N-acetylglucosaminidase activity.
pfam02838 Glyco_hydro_20b 2.41e-17 41 181 1 123
Glycosyl hydrolase family 20, domain 2. This domain has a zincin-like fold.
cd00057 FA58C 1.40e-12 819 940 18 140
Substituted updates: Jan 31, 2002
COG0419 SbcC 1.09e-11 1373 1829 273 740
DNA repair exonuclease SbcCD ATPase subunit [Replication, recombination and repair].
pfam00754 F5_F8_type_C 9.21e-11 815 923 3 111
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AYE33902.1 0.0 1 1887 1 1887
QAS62053.1 0.0 1 1887 1 1887
ATD58081.1 0.0 1 1887 1 1886
QBJ74523.1 0.0 1 1887 1 1886
SLK13108.1 0.0 1 1887 1 1886

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6PV4_A 0.0 42 661 32 653
Structureof CpGH84A [Clostridium perfringens ATCC 13124],6PV4_B Structure of CpGH84A [Clostridium perfringens ATCC 13124],6PV4_C Structure of CpGH84A [Clostridium perfringens ATCC 13124],6PV4_D Structure of CpGH84A [Clostridium perfringens ATCC 13124]
6PWI_A 1.47e-141 30 654 22 626
Structureof CpGH84D [Clostridium perfringens ATCC 13124],6PWI_B Structure of CpGH84D [Clostridium perfringens ATCC 13124]
4TXW_A 2.31e-57 1056 1224 7 173
Crystalstructure of CBM32-4 from the Clostridium perfringens NagH [Clostridium perfringens ATCC 13124]
2LS6_A 1.87e-53 661 798 24 162
SolutionNMR Structure of a Non-canonical galactose-binding CBM32 from Clostridium perfringens [Clostridium perfringens ATCC 13124]
5MI4_A 4.71e-53 101 623 63 551
BtGH84mutant with covalent modification by MA3 [Bacteroides thetaiotaomicron VPI-5482],5MI5_A BtGH84 mutant with covalent modification by MA3 in complex with PUGNAc [Bacteroides thetaiotaomicron VPI-5482],5MI6_A BtGH84 mutant with covalent modification by MA3 in complex with Thiamet G [Bacteroides thetaiotaomicron VPI-5482],5MI7_A BtGH84 mutant with covalent modification by MA4 in complex with PUGNAc [Bacteroides thetaiotaomicron VPI-5482]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P26831 0.0 1 1553 1 1565
Hyaluronoglucosaminidase OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=nagH PE=1 SV=2
Q89ZI2 9.52e-52 101 623 73 561
O-GlcNAcase BT_4395 OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=BT_4395 PE=1 SV=1
Q8XL08 3.34e-46 32 564 35 542
O-GlcNAcase NagJ OS=Clostridium perfringens (strain 13 / Type A) OX=195102 GN=nagJ PE=1 SV=1
Q0TR53 4.41e-46 32 564 35 542
O-GlcNAcase NagJ OS=Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 / NCIMB 6125 / NCTC 8237 / Type A) OX=195103 GN=nagJ PE=1 SV=1
O60502 1.11e-19 189 462 63 331
Protein O-GlcNAcase OS=Homo sapiens OX=9606 GN=OGA PE=1 SV=2

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000491 0.998693 0.000232 0.000221 0.000185 0.000162

TMHMM  Annotations      download full data without filtering help

start end
1860 1882