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CAZyme Information: MGYG000002381_03356

You are here: Home > Sequence: MGYG000002381_03356

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Stenotrophomonas bentonitica_A
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas; Stenotrophomonas bentonitica_A
CAZyme ID MGYG000002381_03356
CAZy Family GH103
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
722 MGYG000002381_60|CGC1 77445.09 8.8927
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002381 4114425 Isolate not provided not provided
Gene Location Start: 1424;  End: 3592  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002381_03356.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH103 26 323 5.9e-109 0.9932203389830508

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam13406 SLT_2 3.78e-141 25 321 1 292
Transglycosylase SLT domain. This family is related to the SLT domain pfam01464.
TIGR02283 MltB_2 1.41e-131 25 325 1 300
lytic murein transglycosylase. Members of this family are closely related to the MltB family lytic murein transglycosylases described by TIGR02282 and are likewise all proteobacterial, although that family and this one form clearly distinct clades. Several species have one member of each family. Many members of this family (unlike the MltB family) contain an additional C-terminal domain, a putative peptidoglycan binding domain (pfam01471), not included in region described by this model. Many sequences appear to contain N-terminal lipoprotein attachment sites, as does E. coli MltB in TIGR02282. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan]
COG2951 MltB 4.40e-109 16 330 31 342
Membrane-bound lytic murein transglycosylase B [Cell wall/membrane/envelope biogenesis].
cd09020 D-hex-6-P-epi_like 2.17e-99 451 718 1 269
D-hexose-6-phosphate epimerase-like. D-Hexose-6-phosphate epimerase Ymr099c from Saccharomyces cerevisiae belongs to the large superfamily of aldose-1-epimerases. Its active site is very similar to the catalytic site of galactose mutarotase, the best studied member of the superfamily. It also contains the conserved glutamate and histidine residues that have been shown in galactose mutarotase to be critical for catalysis, the glutamate serving as the active site base to initiate the reaction by removing the proton from the C-1 hydroxyl group of the sugar substrate, and the histidine as the active site acid to protonate the C-5 ring oxygen. In addition Ymr099c contains 2 conserved arginine residues which are involved in phosphate binding, and exhibits hexose-6-phosphate mutarotase activity on glucose-6-P, galactose-6-P and mannose-6-P.
COG0676 YeaD 2.92e-91 439 715 14 281
D-hexose-6-phosphate mutarotase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AOX62374.1 0.0 1 722 1 722
AOA70506.1 0.0 7 721 8 724
QIO90054.1 0.0 7 722 8 726
QHB73317.1 0.0 1 722 5 725
AHY61028.1 0.0 7 722 1 718

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5AO8_A 1.45e-116 36 399 58 418
CrystalStructure of SltB3 from Pseudomonas aeruginosa in complex with NAG-NAM-pentapeptide [Pseudomonas aeruginosa]
5ANZ_A 5.74e-116 36 399 58 418
CrystalStructure of SltB3 from Pseudomonas aeruginosa. [Pseudomonas aeruginosa],5AO7_A Crystal Structure of SltB3 from Pseudomonas aeruginosa in complex with NAG-anhNAM-pentapeptide [Pseudomonas aeruginosa]
2HTA_A 7.13e-32 439 698 31 286
ChainA, Putative enzyme related to aldose 1-epimerase [Salmonella enterica subsp. enterica serovar Typhimurium],2HTA_B Chain B, Putative enzyme related to aldose 1-epimerase [Salmonella enterica subsp. enterica serovar Typhimurium],2HTB_A Chain A, Putative enzyme related to aldose 1-epimerase [Salmonella enterica subsp. enterica serovar Typhimurium],2HTB_B Chain B, Putative enzyme related to aldose 1-epimerase [Salmonella enterica subsp. enterica serovar Typhimurium],2HTB_C Chain C, Putative enzyme related to aldose 1-epimerase [Salmonella enterica subsp. enterica serovar Typhimurium],2HTB_D Chain D, Putative enzyme related to aldose 1-epimerase [Salmonella enterica subsp. enterica serovar Typhimurium]
5O8X_A 4.68e-28 41 323 20 299
TheX-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa],5O8X_B The X-ray Structure of Catenated Lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa]
4ANR_A 6.57e-28 41 323 37 316
Crystalstructure of soluble lytic Transglycosylase SltB1 from Pseudomonas aeruginosa [Pseudomonas aeruginosa PAO1]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P39173 1.75e-32 439 714 16 287
Putative glucose-6-phosphate 1-epimerase OS=Escherichia coli (strain K12) OX=83333 GN=yeaD PE=1 SV=2
Q8ZPV9 2.79e-31 439 698 16 271
Putative glucose-6-phosphate 1-epimerase OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=yeaD PE=1 SV=1
Q40784 1.52e-25 461 710 46 302
Putative glucose-6-phosphate 1-epimerase OS=Cenchrus ciliaris OX=35872 PE=2 SV=1
P41052 3.54e-25 39 316 70 348
Membrane-bound lytic murein transglycosylase B OS=Escherichia coli (strain K12) OX=83333 GN=mltB PE=1 SV=1
P44160 2.98e-11 479 696 53 251
Putative glucose-6-phosphate 1-epimerase OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_1317 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000296 0.999088 0.000173 0.000153 0.000138 0.000138

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002381_03356.