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CAZyme Information: MGYG000002391_00568
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Oceanobacillus caeni | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes; Bacilli; Bacillales_D; Amphibacillaceae; Oceanobacillus; Oceanobacillus caeni | |||||||||||
| CAZyme ID | MGYG000002391_00568 | |||||||||||
| CAZy Family | CBM50 | |||||||||||
| CAZyme Description | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 40173; End: 41426 Strand: + | |||||||||||
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK06347 | PRK06347 | 2.59e-52 | 28 | 271 | 330 | 591 | 1,4-beta-N-acetylmuramoylhydrolase. |
| PRK06347 | PRK06347 | 4.53e-40 | 55 | 319 | 289 | 568 | 1,4-beta-N-acetylmuramoylhydrolase. |
| pfam00877 | NLPC_P60 | 2.29e-38 | 311 | 415 | 1 | 105 | NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins. |
| PRK13914 | PRK13914 | 1.04e-33 | 1 | 415 | 1 | 480 | invasion associated endopeptidase. |
| COG0791 | Spr | 5.05e-28 | 301 | 414 | 77 | 197 | Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AWI11980.1 | 6.37e-149 | 1 | 417 | 14 | 437 |
| AIF44561.1 | 1.51e-130 | 1 | 417 | 1 | 358 |
| AVR00362.1 | 8.23e-126 | 1 | 417 | 1 | 361 |
| AXI11208.1 | 1.03e-125 | 7 | 417 | 1 | 347 |
| APC50314.1 | 7.14e-123 | 8 | 417 | 1 | 355 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 2K1G_A | 5.69e-16 | 311 | 415 | 18 | 122 | SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12] |
| 7CFL_A | 1.57e-15 | 300 | 415 | 15 | 136 | ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile] |
| 4FDY_A | 6.04e-13 | 311 | 415 | 203 | 309 | ChainA, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50],4FDY_B Chain B, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50] |
| 2MKX_A | 2.43e-12 | 230 | 269 | 7 | 46 | Solutionstructure of LysM the peptidoglycan binding domain of autolysin AtlA from Enterococcus faecalis [Enterococcus faecalis V583] |
| 4XCM_A | 6.19e-11 | 310 | 415 | 125 | 229 | Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| O31852 | 1.34e-76 | 3 | 410 | 2 | 407 | D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1 |
| O07532 | 3.87e-66 | 31 | 417 | 94 | 488 | Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2 |
| P54421 | 4.43e-65 | 99 | 416 | 30 | 334 | Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1 |
| P37710 | 1.56e-38 | 31 | 317 | 431 | 711 | Autolysin OS=Enterococcus faecalis (strain ATCC 700802 / V583) OX=226185 GN=EF_0799 PE=1 SV=2 |
| Q6GJK9 | 3.10e-33 | 3 | 208 | 2 | 206 | N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=sle1 PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000411 | 0.998718 | 0.000199 | 0.000229 | 0.000215 | 0.000191 |