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CAZyme Information: MGYG000002396_01330

You are here: Home > Sequence: MGYG000002396_01330

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bifidobacterium bifidum
Lineage Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Bifidobacteriaceae; Bifidobacterium; Bifidobacterium bifidum
CAZyme ID MGYG000002396_01330
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
494 51555.33 6.1452
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002396 2311342 Isolate South Korea Asia
Gene Location Start: 1542634;  End: 1544118  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002396_01330.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK08581 PRK08581 2.06e-18 239 350 506 618
amidase domain-containing protein.
COG3942 COG3942 5.27e-17 241 351 68 173
Surface antigen [Cell wall/membrane/envelope biogenesis].
pfam05257 CHAP 7.95e-16 241 327 5 81
CHAP domain. This domain corresponds to an amidase function. Many of these proteins are involved in cell wall metabolism of bacteria. This domain is found at the N-terminus of Escherichia coli gss, where it functions as a glutathionylspermidine amidase EC:3.5.1.78. This domain is found to be the catalytic domain of PlyCA. CHAP is the amidase domain of bifunctional Escherichia coli glutathionylspermidine synthetase/amidase, and it catalyzes the hydrolysis of Gsp (glutathionylspermidine) into glutathione and spermidine.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AXM91805.1 0.0 1 494 1 494
BAQ26934.1 8.14e-189 39 494 31 495
ADB09628.1 8.14e-189 39 494 31 495
VEG23600.1 8.14e-189 39 494 31 495
QGM62701.1 2.35e-178 62 494 62 495

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
2LRJ_A 9.46e-10 241 347 11 108
ChainA, Staphyloxanthin biosynthesis protein, putative [Staphylococcus aureus subsp. aureus COL]
2K3A_A 1.77e-09 237 347 48 149
ChainA, CHAP domain protein [Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292]
4CGK_A 7.30e-08 239 317 285 351
Crystalstructure of the essential protein PcsB from Streptococcus pneumoniae [Streptococcus pneumoniae D39],4CGK_B Crystal structure of the essential protein PcsB from Streptococcus pneumoniae [Streptococcus pneumoniae D39]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q2G278 3.65e-10 241 327 178 255
Probable autolysin LDP OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=SAOUHSC_00773 PE=1 SV=1
Q5HDQ9 1.11e-08 241 347 166 263
Staphylococcal secretory antigen ssaA2 OS=Staphylococcus aureus (strain COL) OX=93062 GN=ssaA2 PE=3 SV=1
Q99RX4 1.11e-08 241 347 166 263
Staphylococcal secretory antigen ssaA2 OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=ssaA2 PE=3 SV=1
Q7A423 1.11e-08 241 347 166 263
Staphylococcal secretory antigen ssaA2 OS=Staphylococcus aureus (strain N315) OX=158879 GN=ssaA2 PE=1 SV=1
Q2G2J2 1.11e-08 241 347 166 263
Staphylococcal secretory antigen ssaA2 OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=ssaA2 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999954 0.000080 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

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