Species | Staphylococcus hominis | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus hominis | |||||||||||
CAZyme ID | MGYG000002399_00352 | |||||||||||
CAZy Family | CBM50 | |||||||||||
CAZyme Description | hypothetical protein | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 70031; End: 71557 Strand: + |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
NF033598 | elast_bind_EbpS | 2.39e-33 | 3 | 507 | 1 | 466 | elastin-binding protein EbpS. The elastin-binding protein EbpS is an adhesin described in Staphylococcus aureus, with orthologs found in many additional staphylococcal species. EbpS is a membrane protein that lacks an N-terminal signal peptide region, has extensive regions low-complexity sequence rich in Asn and Gln, and has a C-terminal LysM domain. |
pfam01476 | LysM | 5.55e-07 | 460 | 507 | 1 | 43 | LysM domain. The LysM (lysin motif) domain is about 40 residues long. It is found in a variety of enzymes involved in bacterial cell wall degradation. This domain may have a general peptidoglycan binding function. The structure of this domain is known. |
cd00118 | LysM | 2.38e-06 | 458 | 506 | 1 | 45 | Lysin Motif is a small domain involved in binding peptidoglycan. LysM, a small globular domain with approximately 40 amino acids, is a widespread protein module involved in binding peptidoglycan in bacteria and chitin in eukaryotes. The domain was originally identified in enzymes that degrade bacterial cell walls, but proteins involved in many other biological functions also contain this domain. It has been reported that the LysM domain functions as a signal for specific plant-bacteria recognition in bacterial pathogenesis. Many of these enzymes are modular and are composed of catalytic units linked to one or several repeats of LysM domains. LysM domains are found in bacteria and eukaryotes. |
smart00257 | LysM | 1.21e-04 | 459 | 506 | 1 | 44 | Lysin motif. |
PRK12678 | PRK12678 | 2.24e-04 | 93 | 177 | 203 | 279 | transcription termination factor Rho; Provisional |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AUW62519.1 | 7.52e-179 | 1 | 508 | 1 | 508 |
AVI05238.1 | 7.52e-179 | 1 | 508 | 1 | 508 |
QIY36979.1 | 8.03e-176 | 1 | 508 | 1 | 508 |
QDW86867.1 | 1.31e-174 | 1 | 508 | 1 | 508 |
AUJ51292.1 | 3.97e-112 | 1 | 508 | 1 | 490 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q4L6I5 | 4.78e-39 | 1 | 508 | 1 | 539 | Probable elastin-binding protein EbpS OS=Staphylococcus haemolyticus (strain JCSC1435) OX=279808 GN=ebpS PE=4 SV=1 |
Q8CP59 | 6.73e-16 | 301 | 508 | 276 | 460 | Probable elastin-binding protein EbpS OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=ebpS PE=4 SV=2 |
Q5HP65 | 6.73e-16 | 301 | 508 | 276 | 460 | Probable elastin-binding protein EbpS OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=ebpS PE=4 SV=1 |
Q2YY76 | 3.91e-13 | 458 | 507 | 434 | 483 | Elastin-binding protein EbpS OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) OX=273036 GN=ebpS PE=3 SV=3 |
Q6GGT1 | 3.94e-13 | 458 | 507 | 437 | 486 | Elastin-binding protein EbpS OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=ebpS PE=3 SV=3 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000074 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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