logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002400_02140

You are here: Home > Sequence: MGYG000002400_02140

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus lugdunensis
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus lugdunensis
CAZyme ID MGYG000002400_02140
CAZy Family GH73
CAZyme Description Bifunctional autolysin
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
257 MGYG000002400_36|CGC2 30014.08 9.9404
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002400 2523999 Isolate not provided not provided
Gene Location Start: 125388;  End: 126161  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002400_02140.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH73 113 239 1.8e-23 0.9609375

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG4193 LytD 5.17e-83 14 257 2 245
Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism].
smart00047 LYZ2 1.13e-30 101 243 1 142
Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes.
pfam01832 Glucosaminidase 7.18e-10 113 191 1 76
Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan.
COG1705 FlgJ 0.002 114 226 44 168
Flagellum-specific peptidoglycan hydrolase FlgJ [Cell wall/membrane/envelope biogenesis, Cell motility].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QHP95206.1 7.18e-186 1 257 1 257
ARJ10832.1 7.18e-186 1 257 1 257
AMG62302.1 7.18e-186 1 257 1 257
QOR96958.1 7.18e-186 1 257 1 257
QRF17137.1 7.18e-186 1 257 1 257

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4PI7_A 2.20e-91 39 257 10 228
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
4PI8_A 1.79e-90 39 257 10 228
ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50]
6U0O_B 2.74e-46 13 242 15 261
ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325]
6FXP_A 5.42e-45 33 242 15 231
ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50]
6FXO_A 4.58e-44 60 245 35 232
ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
O33635 1.46e-44 38 245 1103 1323
Bifunctional autolysin OS=Staphylococcus epidermidis OX=1282 GN=atl PE=1 SV=1
Q8CPQ1 1.46e-44 38 245 1103 1323
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 12228 / FDA PCI 1200) OX=176280 GN=atl PE=3 SV=1
Q5HQB9 1.46e-44 38 245 1103 1323
Bifunctional autolysin OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=atl PE=3 SV=1
Q5HH31 3.72e-40 60 245 1047 1244
Bifunctional autolysin OS=Staphylococcus aureus (strain COL) OX=93062 GN=atl PE=3 SV=1
Q6GAG0 5.06e-40 60 245 1041 1238
Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999347 0.000364 0.000054 0.000002 0.000001 0.000253

TMHMM  Annotations      download full data without filtering help

start end
12 34