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CAZyme Information: MGYG000002404_03831

You are here: Home > Sequence: MGYG000002404_03831

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacillus_BE massilionigeriensis
Lineage Bacteria; Firmicutes; Bacilli; Bacillales_B; DSM-18226; Bacillus_BE; Bacillus_BE massilionigeriensis
CAZyme ID MGYG000002404_03831
CAZy Family CBM50
CAZyme Description putative peptidoglycan endopeptidase LytE
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
334 36109.77 10.5051
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002404 4212889 Isolate not provided not provided
Gene Location Start: 3853290;  End: 3854294  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002404_03831.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM50 84 125 3.4e-16 0.95

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
PRK06347 PRK06347 1.76e-38 15 234 321 568
1,4-beta-N-acetylmuramoylhydrolase.
pfam00877 NLPC_P60 1.16e-36 226 332 1 105
NlpC/P60 family. The function of this domain is unknown. It is found in several lipoproteins.
PRK06347 PRK06347 4.42e-35 20 191 401 591
1,4-beta-N-acetylmuramoylhydrolase.
PRK13914 PRK13914 9.70e-28 10 333 185 481
invasion associated endopeptidase.
COG0791 Spr 1.69e-25 216 331 77 197
Cell wall-associated hydrolase, NlpC family [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QKH63463.1 2.51e-89 1 333 1 358
ALC88757.1 1.01e-88 3 332 4 357
QHA37903.1 2.80e-86 1 332 1 327
QQZ11393.1 3.49e-86 24 333 2 331
AYA78092.1 2.23e-85 1 332 1 348

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7CFL_A 5.31e-22 217 333 17 137
ChainA, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_B Chain B, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_C Chain C, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile],7CFL_D Chain D, Putative cell wall hydrolase phosphatase-associated protein [Clostridioides difficile]
4XCM_A 8.05e-16 149 333 4 230
Crystalstructure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8],4XCM_B Crystal structure of the putative NlpC/P60 D,L endopeptidase from T. thermophilus [Thermus thermophilus HB8]
2K1G_A 2.18e-15 226 333 18 123
SolutionNMR structure of lipoprotein spr from Escherichia coli K12. Northeast Structural Genomics target ER541-37-162 [Escherichia coli K-12]
4FDY_A 5.48e-14 208 333 185 310
ChainA, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50],4FDY_B Chain B, Similar to lipoprotein, NLP/P60 family [Staphylococcus aureus subsp. aureus Mu50]
4HPE_A 1.30e-13 216 334 189 307
ChainA, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_B Chain B, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_C Chain C, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_D Chain D, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_E Chain E, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630],4HPE_F Chain F, Putative cell wall hydrolase Tn916-like,CTn1-Orf17 [Clostridioides difficile 630]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P54421 1.04e-65 1 332 1 333
Probable peptidoglycan endopeptidase LytE OS=Bacillus subtilis (strain 168) OX=224308 GN=lytE PE=1 SV=1
O07532 4.94e-61 26 332 175 486
Peptidoglycan endopeptidase LytF OS=Bacillus subtilis (strain 168) OX=224308 GN=lytF PE=1 SV=2
O31852 3.08e-58 20 329 83 409
D-gamma-glutamyl-meso-diaminopimelic acid endopeptidase CwlS OS=Bacillus subtilis (strain 168) OX=224308 GN=cwlS PE=1 SV=1
Q49UX4 1.87e-26 2 192 3 194
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus saprophyticus subsp. saprophyticus (strain ATCC 15305 / DSM 20229 / NCIMB 8711 / NCTC 7292 / S-41) OX=342451 GN=sle1 PE=3 SV=1
Q5HRU2 3.31e-25 2 191 3 190
N-acetylmuramoyl-L-alanine amidase sle1 OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) OX=176279 GN=sle1 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000237 0.999057 0.000175 0.000177 0.000179 0.000160

TMHMM  Annotations      download full data without filtering help

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