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CAZyme Information: MGYG000002407_02451

You are here: Home > Sequence: MGYG000002407_02451

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Cohnella sp900169535
Lineage Bacteria; Firmicutes; Bacilli; Paenibacillales; Paenibacillaceae; Cohnella; Cohnella sp900169535
CAZyme ID MGYG000002407_02451
CAZy Family CBM54
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1330 138997.02 4.1185
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002407 6325359 Isolate not provided not provided
Gene Location Start: 579916;  End: 583908  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002407_02451.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM54 189 301 8.7e-35 0.9824561403508771

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam02368 Big_2 5.10e-12 440 518 1 77
Bacterial Ig-like domain (group 2). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial and phage surface proteins such as intimins.
NF033190 inl_like_NEAT_1 1.68e-11 21 196 575 754
NEAT domain-containing leucine-rich repeat protein. Members of this family have an N-terminal NEAT (near transporter) domain often associated with iron transport, followed by a leucine-rich repeat region with significant sequence similarity to the internalins of Listeria monocytogenes. However, since Bacillus cereus (from which this protein was described, in PMID:16978259) is not considered an intracellular pathogen, and the function may be iron transport rather than internalization, applying the name "internalin" to this family probably would be misleading.
COG5492 YjdB 6.91e-11 437 528 179 269
Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only].
pfam00395 SLH 2.07e-09 144 186 1 42
S-layer homology domain.
pfam00395 SLH 8.05e-08 28 67 1 42
S-layer homology domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ASA25822.1 0.0 22 1330 43 1350
QKS47579.1 0.0 2 1330 4 1076
AEV69543.1 4.20e-93 4 392 3 393
ANX02323.1 6.17e-87 25 1261 48 1325
AGC69451.1 6.53e-86 25 1261 48 1325

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3PYW_A 2.65e-10 27 219 4 196
Thestructure of the SLH domain from B. anthracis surface array protein at 1.8A [Bacillus anthracis]
6BT4_A 1.60e-09 27 186 25 188
Crystalstructure of the SLH domain of Sap from Bacillus anthracis in complex with a pyruvylated SCWP unit [Bacillus anthracis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P38537 3.68e-18 15 201 19 213
Surface-layer 125 kDa protein OS=Lysinibacillus sphaericus OX=1421 PE=3 SV=1
P38536 6.56e-17 27 196 1681 1857
Amylopullulanase OS=Thermoanaerobacterium thermosulfurigenes OX=33950 GN=amyB PE=3 SV=2
P38535 4.73e-14 25 196 905 1083
Exoglucanase XynX OS=Acetivibrio thermocellus OX=1515 GN=xynX PE=3 SV=1
C6CRV0 1.36e-12 27 189 1282 1454
Endo-1,4-beta-xylanase A OS=Paenibacillus sp. (strain JDR-2) OX=324057 GN=xynA1 PE=1 SV=1
P19424 4.53e-10 4 197 7 217
Endoglucanase OS=Bacillus sp. (strain KSM-635) OX=1415 PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000250 0.999063 0.000187 0.000166 0.000163 0.000147

TMHMM  Annotations      download full data without filtering help

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