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CAZyme Information: MGYG000002409_01400
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Gordonibacter massiliensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Eggerthellaceae; Gordonibacter; Gordonibacter massiliensis | |||||||||||
| CAZyme ID | MGYG000002409_01400 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 1634725; End: 1636755 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH73 | 510 | 653 | 6.4e-25 | 0.9609375 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4193 | LytD | 3.86e-59 | 446 | 676 | 43 | 245 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| smart00047 | LYZ2 | 2.53e-23 | 503 | 653 | 5 | 137 | Lysozyme subfamily 2. Eubacterial enzymes distantly related to eukaryotic lysozymes. |
| pfam04122 | CW_binding_2 | 2.04e-12 | 214 | 305 | 1 | 80 | Putative cell wall binding repeat 2. This repeat is found in multiple tandem copies in proteins including amidase enhancers and adhesins. |
| pfam01832 | Glucosaminidase | 2.94e-10 | 511 | 573 | 1 | 46 | Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase. This family includes Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase EC:3.2.1.96. As well as the flageller protein J that has been shown to hydrolyze peptidoglycan. |
| COG2247 | LytB | 2.32e-09 | 138 | 252 | 30 | 147 | Putative cell wall-binding domain [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QOS67179.1 | 1.13e-128 | 70 | 675 | 123 | 714 |
| QKF06896.1 | 1.33e-121 | 115 | 676 | 132 | 698 |
| BCS56855.1 | 1.77e-66 | 435 | 676 | 828 | 1072 |
| BCA89043.1 | 7.09e-66 | 422 | 676 | 788 | 1048 |
| QEZ68409.1 | 2.49e-36 | 447 | 676 | 171 | 394 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 6FXO_A | 2.00e-33 | 476 | 676 | 62 | 244 | ChainA, Bifunctional autolysin [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI7_A | 9.81e-27 | 505 | 662 | 78 | 218 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PI9_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50],4PIA_A Chain A, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 4PI8_A | 6.22e-26 | 505 | 662 | 78 | 218 | ChainA, Autolysin E [Staphylococcus aureus subsp. aureus Mu50] |
| 6FXP_A | 1.54e-25 | 451 | 676 | 46 | 246 | ChainA, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50],6FXP_B Chain B, Uncharacterized protein [Staphylococcus aureus subsp. aureus Mu50] |
| 6U0O_B | 5.13e-25 | 451 | 676 | 76 | 276 | ChainB, LYZ2 domain-containing protein [Staphylococcus aureus subsp. aureus NCTC 8325] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P39848 | 2.67e-33 | 450 | 676 | 678 | 880 | Beta-N-acetylglucosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=lytD PE=1 SV=1 |
| Q99V41 | 1.05e-29 | 476 | 676 | 1066 | 1248 | Bifunctional autolysin OS=Staphylococcus aureus (strain N315) OX=158879 GN=atl PE=1 SV=1 |
| Q931U5 | 1.05e-29 | 476 | 676 | 1066 | 1248 | Bifunctional autolysin OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=atl PE=1 SV=2 |
| Q2FZK7 | 1.06e-29 | 476 | 676 | 1074 | 1256 | Bifunctional autolysin OS=Staphylococcus aureus (strain NCTC 8325 / PS 47) OX=93061 GN=atl PE=1 SV=1 |
| Q6GAG0 | 1.06e-29 | 476 | 676 | 1068 | 1250 | Bifunctional autolysin OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=atl PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as LIPO
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.003352 | 0.456382 | 0.535393 | 0.003486 | 0.001044 | 0.000324 |