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CAZyme Information: MGYG000002409_02536

You are here: Home > Sequence: MGYG000002409_02536

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Gordonibacter massiliensis
Lineage Bacteria; Actinobacteriota; Coriobacteriia; Coriobacteriales; Eggerthellaceae; Gordonibacter; Gordonibacter massiliensis
CAZyme ID MGYG000002409_02536
CAZy Family GH3
CAZyme Description Beta-hexosaminidase
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
434 44130.56 4.0013
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002409 3948172 Isolate not provided not provided
Gene Location Start: 3044565;  End: 3045869  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002409_02536.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH3 161 392 1.7e-53 0.9814814814814815

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1472 BglX 5.54e-74 94 431 1 315
Periplasmic beta-glucosidase and related glycosidases [Carbohydrate transport and metabolism].
pfam00933 Glyco_hydro_3 2.54e-69 95 424 1 313
Glycosyl hydrolase family 3 N terminal domain.
PRK05337 PRK05337 5.18e-37 133 417 26 302
beta-hexosaminidase; Provisional
PRK15098 PRK15098 5.73e-15 223 428 150 353
beta-glucosidase BglX.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QOS67902.1 9.30e-191 22 433 10 412
BAK43667.1 5.57e-184 27 429 16 414
SDR65351.1 5.38e-129 88 431 84 426
QUC04197.1 8.36e-125 78 431 75 431
AKT49854.1 1.34e-121 74 434 54 413

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6K5J_A 1.99e-63 93 428 10 337
Structureof a glycoside hydrolase family 3 beta-N-acetylglucosaminidase from Paenibacillus sp. str. FPU-7 [Paenibacillaceae]
4ZM6_A 1.44e-50 126 428 32 337
Aunique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432],4ZM6_B A unique GCN5-related glucosamine N-acetyltransferase region exist in the fungal multi-domain GH3 beta-N-acetylglucosaminidase [Rhizomucor miehei CAU432]
3BMX_A 3.40e-48 94 429 42 394
Beta-N-hexosaminidase(YbbD) from Bacillus subtilis [Bacillus subtilis],3BMX_B Beta-N-hexosaminidase (YbbD) from Bacillus subtilis [Bacillus subtilis],3NVD_A Structure of YBBD in complex with pugnac [Bacillus subtilis],3NVD_B Structure of YBBD in complex with pugnac [Bacillus subtilis]
3LK6_A 1.24e-47 94 429 16 368
ChainA, Lipoprotein ybbD [Bacillus subtilis],3LK6_B Chain B, Lipoprotein ybbD [Bacillus subtilis],3LK6_C Chain C, Lipoprotein ybbD [Bacillus subtilis],3LK6_D Chain D, Lipoprotein ybbD [Bacillus subtilis]
4GYJ_A 1.82e-47 94 429 46 398
Crystalstructure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYJ_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1) [Bacillus subtilis subsp. subtilis str. 168],4GYK_A Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168],4GYK_B Crystal structure of mutant (D318N) bacillus subtilis family 3 glycoside hydrolase (nagz) in complex with glcnac-murnac (space group P1211) [Bacillus subtilis subsp. subtilis str. 168]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
P40406 1.86e-47 94 429 42 394
Beta-hexosaminidase OS=Bacillus subtilis (strain 168) OX=224308 GN=nagZ PE=1 SV=1
P48823 2.69e-46 126 434 57 386
Beta-hexosaminidase A OS=Pseudoalteromonas piscicida OX=43662 GN=cht60 PE=1 SV=1
L7N6B0 5.03e-41 68 428 31 380
Beta-hexosaminidase LpqI OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=lpqI PE=1 SV=1
A0A0H3M1P5 1.35e-40 68 428 31 380
Beta-hexosaminidase LpqI OS=Mycobacterium bovis (strain BCG / Pasteur 1173P2) OX=410289 GN=lpqI PE=3 SV=1
B4SRK3 8.57e-37 133 392 24 277
Beta-hexosaminidase OS=Stenotrophomonas maltophilia (strain R551-3) OX=391008 GN=nagZ PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as LIPO

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000221 0.012987 0.986744 0.000047 0.000028 0.000003

TMHMM  Annotations      download full data without filtering help

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