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CAZyme Information: MGYG000002424_01448

You are here: Home > Sequence: MGYG000002424_01448

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Monoglobus pectinilyticus
Lineage Bacteria; Firmicutes_A; Clostridia; Monoglobales; Monoglobaceae; Monoglobus; Monoglobus pectinilyticus
CAZyme ID MGYG000002424_01448
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1200 130029.3 4.6257
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002424 2757122 Isolate New Zealand Oceania
Gene Location Start: 1678334;  End: 1681936  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002424_01448.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 93 293 3.4e-66 0.994535519125683

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam18998 Flg_new_2 3.29e-08 1008 1066 17 74
Divergent InlB B-repeat domain. This family of domains are found in bacterial cell surface proteins. They are often found in tandem array. This domain is closely related to pfam09479.
pfam04886 PT 9.52e-08 1067 1100 1 36
PT repeat. This short repeat is composed on the tetrapeptide XPTX. This repeat is found in a variety of proteins, however it is not clear if these repeats are homologous to each other. The alignment represents nine copies of this repeat.
NF033186 internalin_K 9.64e-08 1000 1138 425 575
class 1 internalin InlK. Internalins, as found in the intracellular human pathogen Listeria monocytogenes, are paralogous surface-anchored proteins with an N-terminal signal peptide, leucine-rich repeats, and a C-terminal LPXTG processing and cell surface anchoring site. Members of this family are internalin K (InlK), a virulence factor. See articles PMID:17764999. for a general discussion of internalins, and PMID:21829365, PMID:22082958, and PMID:23958637 for more information about internalin K.
COG3866 PelB 1.50e-07 38 279 27 272
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 3.55e-07 95 279 3 185
Amb_all domain.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AUO19604.1 0.0 1 1200 1 1200
AUO18496.1 0.0 37 795 43 815
AUO20150.1 0.0 6 795 7 796
AUO20302.1 2.21e-266 16 807 6 854
AUO20016.1 6.87e-227 25 799 19 791

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 2.57e-43 41 462 22 411
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
Q0CLG7 2.14e-42 21 462 5 411
Probable pectate lyase C OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=plyC PE=3 SV=1
Q2UB83 3.91e-42 41 462 22 411
Probable pectate lyase C OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyC PE=3 SV=1
Q5B297 1.04e-38 29 462 3 408
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1
B0XMA2 8.38e-38 41 462 23 412
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000389 0.998903 0.000191 0.000173 0.000151 0.000144

TMHMM  Annotations      download full data without filtering help

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