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CAZyme Information: MGYG000002456_01624

You are here: Home > Sequence: MGYG000002456_01624

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Methanomethylophilus alvus
Lineage Archaea; Thermoplasmatota; Thermoplasmata; Methanomassiliicoccales; Methanomethylophilaceae; Methanomethylophilus; Methanomethylophilus alvus
CAZyme ID MGYG000002456_01624
CAZy Family GT66
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1943 206179.55 4.4022
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002456 1666795 Isolate United States North America
Gene Location Start: 1600339;  End: 1606170  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002456_01624.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT66 73 515 4.4e-27 0.5930735930735931

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG1287 Stt3 4.60e-18 35 334 19 306
Asparagine N-glycosylation enzyme, membrane subunit Stt3 [Posttranslational modification, protein turnover, chaperones].
pfam13620 CarboxypepD_reg 5.82e-08 1192 1242 1 52
Carboxypeptidase regulatory-like domain.
COG1807 ArnT 1.14e-06 105 333 66 296
4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis].
pfam10988 DUF2807 4.09e-04 1548 1719 1 174
Putative auto-transporter adhesin, head GIN domain. This bacterial family of proteins shows structural similarity to other pectin lyase families. Although structures from this family align with acetyl-transferases, there is no conservation of catalytic residues found. It is likely that the function is one of cell-adhesion. In Structure 3jx8, it is interesting to note that the sequence of contains several well defined sequence repeats, centred around GSG motifs defining the tight beta turn between the two sheets of the super-helix; there are 8 such repeats in the C-terminal half of the protein, which could be grouped into 4 repeats of two. It seems likely that this family belongs to the superfamily of trimeric auto-transporter adhesins (TAAs), which are important virulence factors in Gram-negative pathogens. In the case of Parabacteroides distasonis, which is a component of the normal distal human gut microbiota, TAA-like complexes probably modulate adherence to the host (information derived from TOPSAN).
pfam02369 Big_1 0.004 1187 1242 3 62
Bacterial Ig-like domain (group 1). This family consists of bacterial domains with an Ig-like fold. Members of this family are found in bacterial surface proteins such as intimins and invasins involved in pathogenicity.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AYQ55719.1 0.0 1 1943 1 1943
AIZ57239.1 0.0 1 1943 1 1911
AMH93783.1 0.0 1 1943 1 1867
QHK18259.1 2.03e-264 90 1943 3 1799
AMK14457.1 2.26e-205 1 1943 1 1808

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999940 0.000091 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      download full data without filtering help

start end
35 57
102 124
129 151
161 180
187 206
226 243
250 269
273 295
302 324
329 351
416 433
438 457
484 506
1913 1935