Species | Yersinia frederiksenii | |||||||||||
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Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia frederiksenii | |||||||||||
CAZyme ID | MGYG000002466_00411 | |||||||||||
CAZy Family | AA6 | |||||||||||
CAZyme Description | NAD(P)H dehydrogenase (quinone) | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 440343; End: 440942 Strand: + |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
AA6 | 3 | 196 | 9e-83 | 0.9948717948717949 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
PRK03767 | PRK03767 | 1.58e-134 | 1 | 198 | 1 | 199 | NAD(P)H:quinone oxidoreductase; Provisional |
TIGR01755 | flav_wrbA | 1.25e-112 | 2 | 197 | 1 | 197 | NAD(P)H:quinone oxidoreductase, type IV. This model represents a protein, WrbA, related to and slightly larger than flavodoxin. It was just shown, in E. coli and Archaeoglobus fulgidus (and previously for some eukaryotic homologs) to act as fourth type of NAD(P)H:quinone oxidoreductase. In E. coli, this protein was earlier reported to be produced during stationary phase, bind to the trp repressor, and make trp operon repression more efficient. WrbA does not interact with the trp operator by itself. Members are found in species in which homologs of the E. coli trp operon repressor TrpR (SP:P03032) are not detected. [Energy metabolism, Electron transport] |
COG0655 | WrbA | 3.71e-60 | 1 | 198 | 3 | 206 | Multimeric flavodoxin WrbA [Energy production and conversion]. |
COG0426 | NorV | 7.76e-12 | 2 | 125 | 247 | 349 | Flavorubredoxin [Energy production and conversion]. |
pfam03358 | FMN_red | 1.46e-10 | 3 | 144 | 2 | 143 | NADPH-dependent FMN reductase. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
CDM84515.1 | 3.19e-64 | 3 | 198 | 4 | 200 |
QIH44907.1 | 1.37e-63 | 3 | 198 | 4 | 201 |
CAG1846839.1 | 2.59e-63 | 1 | 198 | 2 | 200 |
CAG7892556.1 | 3.79e-63 | 3 | 198 | 4 | 200 |
BAS94766.1 | 3.92e-63 | 3 | 198 | 4 | 200 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
2R96_A | 3.25e-118 | 1 | 197 | 1 | 196 | Crystalstructure of E. coli WrbA in complex with FMN [Escherichia coli],2R96_C Crystal structure of E. coli WrbA in complex with FMN [Escherichia coli],2R97_A Crystal structure of E. coli WrbA in complex with FMN [Escherichia coli],2R97_C Crystal structure of E. coli WrbA in complex with FMN [Escherichia coli],2RG1_A Crystal structure of E. coli WrbA apoprotein [Escherichia coli],2RG1_B Crystal structure of E. coli WrbA apoprotein [Escherichia coli],3B6I_A WrbA from Escherichia coli, native structure [Escherichia coli K-12],3B6I_B WrbA from Escherichia coli, native structure [Escherichia coli K-12],3B6J_A WrbA from Escherichia coli, NADH complex [Escherichia coli K-12],3B6J_B WrbA from Escherichia coli, NADH complex [Escherichia coli K-12],3B6K_A WrbA from Escherichia coli, Benzoquinone complex [Escherichia coli K-12],3B6K_B WrbA from Escherichia coli, Benzoquinone complex [Escherichia coli K-12],3B6M_A WrbA from Escherichia coli, second crystal form [Escherichia coli K-12],3B6M_B WrbA from Escherichia coli, second crystal form [Escherichia coli K-12] |
4DY4_A | 1.82e-117 | 2 | 197 | 1 | 195 | Highresolution structure of E.coli WrbA with FMN [Escherichia coli APEC O1],4DY4_C High resolution structure of E.coli WrbA with FMN [Escherichia coli APEC O1] |
3ZHO_A | 1.49e-116 | 2 | 197 | 1 | 195 | X-raystructure of E.coli Wrba in complex with FMN at 1.2 A resolution [Escherichia coli],3ZHO_B X-ray structure of E.coli Wrba in complex with FMN at 1.2 A resolution [Escherichia coli],4YQE_A Crystal structure of E. coli WrbA in complex with benzoquinone [Escherichia coli K-12],4YQE_B Crystal structure of E. coli WrbA in complex with benzoquinone [Escherichia coli K-12],5F12_A WrbA in complex with FMN under crystallization conditions of WrbA-FMN-BQ structure (4YQE) [Escherichia coli K-12],5F12_B WrbA in complex with FMN under crystallization conditions of WrbA-FMN-BQ structure (4YQE) [Escherichia coli K-12] |
4LA4_A | 2.41e-73 | 3 | 197 | 4 | 203 | Crystalstructure of native PnpB [Pseudomonas sp. WBC-3],4LA4_B Crystal structure of native PnpB [Pseudomonas sp. WBC-3],4LAF_A Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_B Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_C Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3],4LAF_D Crystal structure of PnpB complex with FMN [Pseudomonas sp. WBC-3] |
5F4B_A | 1.93e-71 | 1 | 197 | 4 | 200 | Structureof B. abortus WrbA-related protein A (WrpA) [Brucella abortus 2308],5F4B_B Structure of B. abortus WrbA-related protein A (WrpA) [Brucella abortus 2308] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q1C8L9 | 3.29e-136 | 1 | 198 | 1 | 198 | NAD(P)H dehydrogenase (quinone) OS=Yersinia pestis bv. Antiqua (strain Antiqua) OX=360102 GN=YPA_1236 PE=3 SV=1 |
B2K198 | 3.29e-136 | 1 | 198 | 1 | 198 | NAD(P)H dehydrogenase (quinone) OS=Yersinia pseudotuberculosis serotype IB (strain PB1/+) OX=502801 GN=YPTS_1860 PE=3 SV=1 |
A1JMU2 | 3.29e-136 | 1 | 197 | 1 | 197 | NAD(P)H dehydrogenase (quinone) OS=Yersinia enterocolitica serotype O:8 / biotype 1B (strain NCTC 13174 / 8081) OX=393305 GN=YE1941 PE=3 SV=1 |
Q8ZF61 | 3.29e-136 | 1 | 198 | 1 | 198 | NAD(P)H dehydrogenase (quinone) OS=Yersinia pestis OX=632 GN=YPO1857 PE=3 SV=1 |
A4TK49 | 3.29e-136 | 1 | 198 | 1 | 198 | NAD(P)H dehydrogenase (quinone) OS=Yersinia pestis (strain Pestoides F) OX=386656 GN=YPDSF_1268 PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000040 | 0.000001 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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