dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002473_00520

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Basic Information help

Species

Victivallis vadensis

Lineage

Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis vadensis

CAZyme ID

MGYG000002473_00520

CAZy Family

GH5

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
637		70501.53	5.6768

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002473	4576885	Isolate	not provided	not provided

Gene Location

Start: 58653; End: 60566 Strand: -

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000002473_00520.

CAZyme Signature Domains help

Family	Start	End	Evalue	family coverage
GH5	87	317	5.2e-33	0.8021978021978022

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
COG3934	COG3934	7.31e-27	8	528	4	514	Endo-1,4-beta-mannosidase [Carbohydrate transport and metabolism].
pfam08532	Glyco_hydro_42M	1.08e-04	388	532	36	191	Beta-galactosidase trimerisation domain. This is non catalytic domain B of beta-galactosidase enzymes belong to the glycosyl hydrolase 42 family. This domain is related to glutamine amidotransferase enzymes, but the catalytic residues are replaced by non functional amino acids. This domain is involved in trimerisation.

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
PVY35568.1	0.0	1	637	1	637
AVM43652.1	1.44e-285	1	634	10	642
AMJ67494.1	3.00e-191	6	636	29	662
SDT99127.1	8.71e-178	6	634	9	631
ANE45096.1	2.65e-174	8	631	13	641

PDB Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
7LR7_A	2.93e-14	11	377	17	362	ChainA, Uncharacterized protein ScGH5_18 [Streptomyces cattleya NRRL 8057 = DSM 46488]
7LR8_A	1.62e-13	11	377	17	362	ChainA, Uncharacterized protein ScGH5_18 [Streptomyces cattleya NRRL 8057 = DSM 46488],7LR8_B Chain B, Uncharacterized protein ScGH5_18 [Streptomyces cattleya NRRL 8057 = DSM 46488]
7LR1_A	2.18e-12	11	346	24	339	ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR1_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_A Chain A, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR2_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813]
7LR6_A	1.19e-11	11	346	24	339	ChainA, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_B Chain B, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_C Chain C, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813],7LR6_D Chain D, Glycosyl hydrolase BlGH5_18 [Bifidobacterium longum subsp. longum ATCC 55813]
6GVB_A	2.48e-11	10	351	3	330	ChainA, exo-beta-1,4-mannosidase [Cutibacterium acnes],6GVB_B Chain B, exo-beta-1,4-mannosidase [Cutibacterium acnes],6GVB_C Chain C, exo-beta-1,4-mannosidase [Cutibacterium acnes],6GVB_D Chain D, exo-beta-1,4-mannosidase [Cutibacterium acnes]

Swiss-Prot Hits help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000059	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations help

There is no transmembrane helices in MGYG000002473_00520.