Species | Victivallis vadensis | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Verrucomicrobiota; Lentisphaeria; Victivallales; Victivallaceae; Victivallis; Victivallis vadensis | |||||||||||
CAZyme ID | MGYG000002473_03493 | |||||||||||
CAZy Family | GT83 | |||||||||||
CAZyme Description | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 2; End: 1690 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT83 | 2 | 500 | 2.6e-109 | 0.9111111111111111 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
PRK13279 | arnT | 5.14e-128 | 2 | 536 | 6 | 536 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase. |
COG1807 | ArnT | 1.13e-50 | 1 | 443 | 7 | 436 | 4-amino-4-deoxy-L-arabinose transferase or related glycosyltransferase of PMT family [Cell wall/membrane/envelope biogenesis]. |
pfam13231 | PMT_2 | 2.14e-14 | 58 | 220 | 2 | 157 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This family contains members that are not captured by pfam02366. |
pfam02366 | PMT | 1.23e-13 | 1 | 235 | 2 | 245 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
COG1928 | PMT1 | 0.001 | 42 | 216 | 55 | 263 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AVM46372.1 | 1.24e-231 | 1 | 553 | 1 | 552 |
QSH42095.1 | 1.10e-127 | 2 | 526 | 3 | 525 |
QSH42096.1 | 1.93e-103 | 11 | 536 | 13 | 535 |
CBX27700.1 | 1.17e-96 | 11 | 536 | 16 | 544 |
AXU96019.1 | 1.25e-93 | 11 | 538 | 14 | 535 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5EZM_A | 3.34e-32 | 12 | 334 | 42 | 364 | CrystalStructure of ArnT from Cupriavidus metallidurans in the apo state [Cupriavidus metallidurans CH34],5F15_A Crystal Structure of ArnT from Cupriavidus metallidurans bound to Undecaprenyl phosphate [Cupriavidus metallidurans CH34] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
A8FRR0 | 7.34e-91 | 9 | 536 | 14 | 527 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Shewanella sediminis (strain HAW-EB3) OX=425104 GN=arnT PE=3 SV=1 |
A4SQX1 | 3.18e-89 | 5 | 490 | 6 | 482 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Aeromonas salmonicida (strain A449) OX=382245 GN=arnT PE=3 SV=1 |
B2VBI7 | 5.65e-88 | 2 | 522 | 5 | 515 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Erwinia tasmaniensis (strain DSM 17950 / CFBP 7177 / CIP 109463 / NCPPB 4357 / Et1/99) OX=465817 GN=arnT PE=3 SV=1 |
Q6D2F3 | 8.57e-88 | 11 | 490 | 17 | 488 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Pectobacterium atrosepticum (strain SCRI 1043 / ATCC BAA-672) OX=218491 GN=arnT PE=3 SV=1 |
A0KGY4 | 2.64e-87 | 5 | 528 | 6 | 517 | Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase OS=Aeromonas hydrophila subsp. hydrophila (strain ATCC 7966 / DSM 30187 / BCRC 13018 / CCUG 14551 / JCM 1027 / KCTC 2358 / NCIMB 9240 / NCTC 8049) OX=380703 GN=arnT PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.063980 | 0.933241 | 0.001167 | 0.000531 | 0.000468 | 0.000570 |
start | end |
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3 | 25 |
77 | 99 |
108 | 130 |
134 | 151 |
160 | 174 |
178 | 195 |
202 | 224 |
257 | 279 |
292 | 311 |
316 | 338 |
351 | 373 |
383 | 402 |
409 | 431 |
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