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CAZyme Information: MGYG000002476_00034

You are here: Home > Sequence: MGYG000002476_00034

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Yersinia pestis
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Yersinia; Yersinia pestis
CAZyme ID MGYG000002476_00034
CAZy Family GH23
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
168 18631.5 9.7541
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002476 4935125 Isolate Russia Europe
Gene Location Start: 28986;  End: 29492  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002476_00034.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH23 34 150 2.7e-20 0.8148148148148148

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd13400 LT_IagB-like 7.17e-49 32 149 1 109
Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda.
PRK15328 PRK15328 1.69e-38 8 150 5 142
type III secretion system invasion protein IagB.
PRK13722 PRK13722 4.65e-25 24 168 22 153
lytic transglycosylase; Provisional
pfam01464 SLT 1.18e-19 25 142 1 110
Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems.
COG0741 MltE 3.24e-10 25 146 143 258
Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AVX40715.1 2.09e-116 1 168 1 168
ABS45590.1 2.09e-116 1 168 1 168
AWK15607.1 4.14e-75 9 166 9 166
ASS84923.1 1.26e-64 7 168 5 166
AIN25225.1 9.73e-62 19 168 17 166

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4XP8_A 7.70e-13 24 111 3 86
Structureof EtgA D60N mutant [Escherichia coli]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8X6H3 3.09e-28 12 150 14 156
Peptidoglycan-binding-like protein OS=Escherichia coli O157:H7 OX=83334 GN=pbl PE=3 SV=1
P0CL15 1.29e-25 8 150 5 142
Invasion protein IagB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=iagB PE=3 SV=1
P43018 1.29e-25 8 150 5 142
Invasion protein IagB OS=Salmonella typhi OX=90370 GN=iagB PE=3 SV=1
E1WAC2 1.29e-25 8 150 5 142
Invasion protein IagB OS=Salmonella typhimurium (strain SL1344) OX=216597 GN=iagB PE=3 SV=1
P17738 7.16e-24 24 168 22 153
X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000904 0.998164 0.000279 0.000217 0.000205 0.000193

TMHMM  Annotations      download full data without filtering help

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