Species | Phocaeicola dorei | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola dorei | |||||||||||
CAZyme ID | MGYG000002478_00043 | |||||||||||
CAZy Family | GH16 | |||||||||||
CAZyme Description | Keratan-sulfate endo-1,4-beta-galactosidase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 57951; End: 58742 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH16 | 34 | 260 | 1.7e-51 | 0.9956521739130435 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
cd08023 | GH16_laminarinase_like | 1.57e-73 | 34 | 260 | 1 | 235 | Laminarinase, member of the glycosyl hydrolase family 16. Laminarinase, also known as glucan endo-1,3-beta-D-glucosidase, is a glycosyl hydrolase family 16 member that hydrolyzes 1,3-beta-D-glucosidic linkages in 1,3-beta-D-glucans such as laminarins, curdlans, paramylons, and pachymans, with very limited action on mixed-link (1,3-1,4-)-beta-D-glucans. |
cd00413 | Glyco_hydrolase_16 | 7.86e-25 | 36 | 260 | 1 | 210 | glycosyl hydrolase family 16. The O-Glycosyl hydrolases are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A glycosyl hydrolase classification system based on sequence similarity has led to the definition of more than 95 different families inlcuding glycosyl hydrolase family 16. Family 16 includes lichenase, xyloglucan endotransglycosylase (XET), beta-agarase, kappa-carrageenase, endo-beta-1,3-glucanase, endo-beta-1,3-1,4-glucanase, and endo-beta-galactosidase, all of which have a conserved jelly roll fold with a deep active site channel harboring the catalytic residues. |
COG2273 | BglS | 4.68e-20 | 14 | 262 | 25 | 267 | Beta-glucanase, GH16 family [Carbohydrate transport and metabolism]. |
cd08024 | GH16_CCF | 8.24e-17 | 93 | 237 | 98 | 276 | Coelomic cytolytic factor, member of glycosyl hydrolase family 16. Subgroup of glucanases of unknown function that are related to beta-GRP (beta-1,3-glucan recognition protein), but contain active site residues. Beta-GRPs are one group of pattern recognition receptors (PRRs), also referred to as biosensor proteins, that complexes with pathogen-associated beta-1,3-glucans and then transduces signals necessary for activation of an appropriate innate immune response. Beta-GRPs are present in insects and lack all catalytic residues. This subgroup contains related proteins that still contain the active site and are widely distributed in eukaryotes. Their structures adopt a jelly roll fold with a deep active site channel harboring the catalytic residues, like those of other glycosyl hydrolase family 16 members. |
cd02182 | GH16_Strep_laminarinase_like | 5.41e-15 | 30 | 261 | 2 | 259 | Streptomyces laminarinase-like, member of glycosyl hydrolase family 16. Proteins similar to Streptomyces sioyaensis beta-1,3-glucanase (laminarinase) present in Actinomycetales as well as Peziomycotina. Laminarinases belong to glycosyl hydrolase family 16 and hydrolyze the glycosidic bond of the 1,3-beta-linked glucan, a major component of fungal and plant cell walls and the structural and storage polysaccharides (laminarin) of marine macro-algae. Members of the GH16 family have a conserved jelly roll fold with an active site channel. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
AND18071.1 | 4.93e-205 | 1 | 263 | 1 | 263 |
QJR65105.1 | 4.93e-205 | 1 | 263 | 1 | 263 |
QJR60937.1 | 4.93e-205 | 1 | 263 | 1 | 263 |
QUT85345.1 | 4.93e-205 | 1 | 263 | 1 | 263 |
ALA72086.1 | 4.93e-205 | 1 | 263 | 1 | 263 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
6T2R_AAA | 2.76e-109 | 24 | 261 | 23 | 262 | ChainAAA, Beta-glycosidase [Bacteroides caccae] |
3ILN_A | 2.45e-32 | 30 | 260 | 5 | 247 | ChainA, Laminarinase [Rhodothermus marinus],3ILN_B Chain B, Laminarinase [Rhodothermus marinus] |
6T2O_AAA | 3.05e-28 | 32 | 258 | 37 | 271 | ChainAAA, Glycosyl hydrolase family 16 [Bacteroides caccae ATCC 43185],6T2O_BBB Chain BBB, Glycosyl hydrolase family 16 [Bacteroides caccae ATCC 43185] |
4CRQ_A | 5.69e-28 | 28 | 262 | 1 | 232 | Crystalstructure of the catalytic domain of the modular laminarinase ZgLamC mutant E142S [Zobellia galactanivorans],4CRQ_B Crystal structure of the catalytic domain of the modular laminarinase ZgLamC mutant E142S [Zobellia galactanivorans],4CTE_A Crystal structure of the catalytic domain of the modular laminarinase ZgLamC mutant E142S in complex with a thio-oligosaccharide [Zobellia galactanivorans],4CTE_B Crystal structure of the catalytic domain of the modular laminarinase ZgLamC mutant E142S in complex with a thio-oligosaccharide [Zobellia galactanivorans] |
5WUT_A | 5.96e-28 | 27 | 261 | 2 | 235 | Crystalstructure of laminarinase from Flavobacterium sp. UMI-01 [Flavobacterium sp.],5WUT_B Crystal structure of laminarinase from Flavobacterium sp. UMI-01 [Flavobacterium sp.] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q9ZG90 | 3.35e-48 | 23 | 261 | 49 | 288 | Keratan-sulfate endo-1,4-beta-galactosidase OS=Sphingobacterium multivorum OX=28454 PE=1 SV=1 |
P45798 | 1.87e-33 | 1 | 260 | 13 | 282 | Beta-glucanase OS=Rhodothermus marinus OX=29549 GN=bglA PE=1 SV=1 |
P23903 | 1.09e-16 | 32 | 263 | 425 | 682 | Glucan endo-1,3-beta-glucosidase A1 OS=Niallia circulans OX=1397 GN=glcA PE=1 SV=1 |
Q8N0N3 | 9.47e-07 | 86 | 152 | 123 | 192 | Beta-1,3-glucan-binding protein OS=Penaeus monodon OX=6687 PE=2 SV=1 |
Q9Z3Q2 | 4.70e-06 | 94 | 260 | 303 | 457 | Endo-1,3-1,4-beta-glycanase EglC OS=Rhizobium meliloti (strain 1021) OX=266834 GN=eglC PE=3 SV=2 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.001574 | 0.563085 | 0.434543 | 0.000339 | 0.000221 | 0.000213 |
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