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CAZyme Information: MGYG000002478_03037

You are here: Home > Sequence: MGYG000002478_03037

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Phocaeicola dorei
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola dorei
CAZyme ID MGYG000002478_03037
CAZy Family GH106
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
1076 MGYG000002478_1|CGC59 121497.45 6.3327
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002478 5444912 Isolate Finland Europe
Gene Location Start: 3744936;  End: 3748166  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.40

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH106 359 720 1.6e-117 0.4526699029126214

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17132 Glyco_hydro_106 0.0 32 876 2 866
alpha-L-rhamnosidase.
PRK10150 PRK10150 2.00e-05 916 1029 22 137
beta-D-glucuronidase; Provisional
cd00057 FA58C 0.001 239 293 69 126
Substituted updates: Jan 31, 2002
pfam00754 F5_F8_type_C 0.005 220 293 36 110
F5/8 type C domain. This domain is also known as the discoidin (DS) domain family.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QJR59439.1 0.0 1 1076 1 1076
ALA74607.1 0.0 1 1076 1 1076
QJR55762.1 0.0 1 1076 1 1076
AII68823.1 0.0 1 1076 1 1076
QJR63638.1 0.0 1 1076 1 1076

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5MQM_A 0.0 8 1071 12 1098
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron],5MQN_A Glycoside hydrolase BT_0986 [Bacteroides thetaiotaomicron]
5MWK_A 0.0 8 1071 12 1098
Glycosidehydrolase BT_0986 [Bacteroides thetaiotaomicron]
6Q2F_A 5.51e-113 22 1068 39 1135
Structureof Rhamnosidase from Novosphingobium sp. PP1Y [Novosphingobium sp. PP1Y]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KNA8 1.27e-96 31 920 35 756
Putative beta-glucuronidase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22040 PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.001398 0.997586 0.000398 0.000214 0.000184 0.000185

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002478_03037.