Species | Proteus penneri | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Proteus; Proteus penneri | |||||||||||
CAZyme ID | MGYG000002488_01921 | |||||||||||
CAZy Family | GT51 | |||||||||||
CAZyme Description | Penicillin-binding protein 1B | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 665760; End: 666536 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT51 | 157 | 239 | 1.2e-25 | 0.4632768361581921 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
PRK09506 | mrcB | 4.78e-149 | 1 | 236 | 46 | 282 | bifunctional glycosyl transferase/transpeptidase; Reviewed |
TIGR02071 | PBP_1b | 6.00e-119 | 19 | 241 | 1 | 227 | penicillin-binding protein 1B. Bacterial that synthesize a cell wall of peptidoglycan (murein) generally have several transglycosylases and transpeptidases for the task. This family consists of a particular bifunctional transglycosylase/transpeptidase in E. coli and other Proteobacteria, designated penicillin-binding protein 1B. [Cell envelope, Biosynthesis and degradation of murein sacculus and peptidoglycan] |
PRK14850 | PRK14850 | 5.10e-94 | 22 | 236 | 14 | 228 | penicillin-binding protein 1b; Provisional |
pfam14814 | UB2H | 1.46e-35 | 65 | 149 | 1 | 85 | Bifunctional transglycosylase second domain. UB2H is the second domain of the transglycosylases, or penicillin-binding proteins PBP1bs)), the multi-domain membrane proteins essential for cell wall synthesis that are targeted by penicillin antibiotics. The exact function of the UB2H domain is uncertain, but it may act as the binding component of PBP1b with different binding partners, or it may participate in the regulation between DNA repair and/or synthesis and cell wall formation during the bacterial cell cycle. |
COG0744 | MrcB | 2.07e-35 | 81 | 250 | 5 | 161 | Membrane carboxypeptidase (penicillin-binding protein) [Cell wall/membrane/envelope biogenesis]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
VTP83354.1 | 3.08e-168 | 1 | 240 | 1 | 240 |
QPT34841.1 | 4.49e-163 | 1 | 240 | 1 | 240 |
QKJ50023.1 | 1.02e-161 | 1 | 240 | 1 | 240 |
QPB78626.1 | 1.02e-161 | 1 | 240 | 1 | 240 |
QHN09673.1 | 1.02e-161 | 1 | 240 | 1 | 240 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
5FGZ_A | 1.92e-106 | 15 | 235 | 6 | 226 | E.coli PBP1b in complex with FPI-1465 [Escherichia coli K-12],5HL9_A E. coli PBP1b in complex with acyl-ampicillin and moenomycin [Escherichia coli K-12],5HLA_A E. coli PBP1b in complex with acyl-cephalexin and moenomycin [Escherichia coli K-12],5HLB_A E. coli PBP1b in complex with acyl-aztreonam and moenomycin [Escherichia coli K-12],5HLD_A E. coli PBP1b in complex with acyl-CENTA and moenomycin [Escherichia coli K-12],6YN0_A Structure of E. coli PBP1b with a FtsN peptide activating transglycosylase activity [Escherichia coli K-12],7LQ6_A Chain A, Penicillin-binding protein 1B [Escherichia coli K-12] |
3VMA_A | 3.10e-106 | 15 | 235 | 27 | 247 | CrystalStructure of the Full-Length Transglycosylase PBP1b from Escherichia coli [Escherichia coli K-12] |
3FWL_A | 1.18e-101 | 15 | 235 | 10 | 230 | CrystalStructure of the Full-Length Transglycosylase PBP1b from Escherichia coli [Escherichia coli] |
6FZK_A | 2.32e-38 | 60 | 152 | 22 | 114 | NMRstructure of UB2H, regulatory domain of PBP1b from E. coli [Escherichia coli K-12],6G5R_A Structure of the UB2H domain of E.coli PBP1B in complex with LpoB [Escherichia coli K-12] |
2OQO_A | 3.38e-20 | 163 | 240 | 18 | 95 | Crystalstructure of a peptidoglycan glycosyltransferase from a class A PBP: insight into bacterial cell wall synthesis [Aquifex aeolicus VF5],3D3H_A Crystal structure of a complex of the peptidoglycan glycosyltransferase domain from Aquifex aeolicus and neryl moenomycin A [Aquifex aeolicus],3NB7_A Crystal structure of Aquifex Aeolicus Peptidoglycan Glycosyltransferase in complex with Decarboxylated Neryl Moenomycin [Aquifex aeolicus] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
P02919 | 4.60e-100 | 22 | 235 | 70 | 283 | Penicillin-binding protein 1B OS=Escherichia coli (strain K12) OX=83333 GN=mrcB PE=1 SV=2 |
P57296 | 5.56e-76 | 19 | 236 | 8 | 225 | Penicillin-binding protein 1B OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) OX=107806 GN=mrcB PE=3 SV=1 |
Q89AR2 | 4.03e-67 | 7 | 236 | 3 | 228 | Penicillin-binding protein 1B OS=Buchnera aphidicola subsp. Baizongia pistaciae (strain Bp) OX=224915 GN=mrcB PE=3 SV=1 |
Q9KUC0 | 2.54e-64 | 14 | 257 | 30 | 264 | Penicillin-binding protein 1B OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) OX=243277 GN=mrcB PE=3 SV=1 |
P45345 | 6.59e-57 | 2 | 246 | 6 | 255 | Penicillin-binding protein 1B OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=mrcB PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000010 | 0.000018 | 0.000000 | 0.000000 | 0.000000 | 0.000001 |
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