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CAZyme Information: MGYG000002507_04328
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Escherichia albertii | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia; Escherichia albertii | |||||||||||
| CAZyme ID | MGYG000002507_04328 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 16194; End: 16697 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH23 | 36 | 159 | 3.6e-17 | 0.8518518518518519 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd13400 | LT_IagB-like | 3.64e-45 | 36 | 154 | 1 | 108 | Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda. |
| PRK15328 | PRK15328 | 9.88e-40 | 11 | 163 | 4 | 149 | type III secretion system invasion protein IagB. |
| pfam01464 | SLT | 2.54e-29 | 29 | 152 | 1 | 114 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
| PRK13722 | PRK13722 | 9.97e-23 | 28 | 156 | 22 | 145 | lytic transglycosylase; Provisional |
| COG0741 | MltE | 3.08e-15 | 16 | 154 | 130 | 265 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QST29211.1 | 1.94e-116 | 1 | 167 | 1 | 167 |
| QST38577.1 | 1.94e-116 | 1 | 167 | 1 | 167 |
| QTA26910.1 | 5.55e-116 | 1 | 167 | 1 | 167 |
| BAT44822.1 | 1.53e-113 | 1 | 167 | 1 | 167 |
| QST65143.1 | 1.26e-112 | 1 | 167 | 1 | 167 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4XP8_A | 7.30e-08 | 28 | 113 | 3 | 82 | Structureof EtgA D60N mutant [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q8X6H3 | 1.15e-70 | 9 | 167 | 9 | 167 | Peptidoglycan-binding-like protein OS=Escherichia coli O157:H7 OX=83334 GN=pbl PE=3 SV=1 |
| Q46790 | 4.90e-63 | 9 | 148 | 9 | 148 | Putative peptidoglycan-binding-like protein OS=Escherichia coli (strain K12) OX=83333 GN=pbl PE=5 SV=2 |
| Q07568 | 1.99e-22 | 28 | 153 | 20 | 138 | Protein IpgF OS=Shigella flexneri OX=623 GN=ipgF PE=3 SV=1 |
| E1WAC2 | 6.82e-22 | 28 | 156 | 21 | 142 | Invasion protein IagB OS=Salmonella typhimurium (strain SL1344) OX=216597 GN=iagB PE=3 SV=1 |
| P0CL15 | 6.82e-22 | 28 | 156 | 21 | 142 | Invasion protein IagB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=iagB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000369 | 0.998928 | 0.000249 | 0.000139 | 0.000151 | 0.000150 |