You are browsing environment: HUMAN GUT
CAZyme Information: MGYG000002511_03541
You are here: Home > Sequence: MGYG000002511_03541
Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Klebsiella variicola | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella variicola | |||||||||||
| CAZyme ID | MGYG000002511_03541 | |||||||||||
| CAZy Family | GT19 | |||||||||||
| CAZyme Description | Lipid-A-disaccharide synthase | |||||||||||
| CAZyme Property |
|
|||||||||||
| Genome Property |
|
|||||||||||
| Gene Location | Start: 199962; End: 201113 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GT19 | 9 | 366 | 8.9e-141 | 0.9943502824858758 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| TIGR00215 | lpxB | 0.0 | 1 | 380 | 1 | 385 | lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides] |
| COG0763 | LpxB | 0.0 | 6 | 383 | 1 | 381 | Lipid A disaccharide synthetase [Cell wall/membrane/envelope biogenesis]. |
| PRK00025 | lpxB | 0.0 | 6 | 383 | 1 | 377 | lipid-A-disaccharide synthase; Reviewed |
| pfam02684 | LpxB | 0.0 | 9 | 377 | 1 | 374 | Lipid-A-disaccharide synthetase. This is a family of lipid-A-disaccharide synthetases, EC:2.4.2.128. These enzymes catalyze the reaction: UDP-2,3-bis(3-hydroxytetradecanoyl) glucosamine + 2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate <=> UDP + 2,3-bis(3-hydroxytetradecanoyl)-D-glucosaminyl-1,6 -beta-D-2,3-bis(3-hydroxytetradecanoyl)-beta-D-glucosaminyl 1-phosphate. These enzymes catalyze the fist disaccharide step in the synthesis of lipid-A-disaccharide. |
| PRK01021 | lpxB | 3.82e-48 | 11 | 328 | 231 | 551 | lipid-A-disaccharide synthase; Reviewed |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AXO71534.1 | 8.72e-280 | 1 | 383 | 1 | 383 |
| AJA95687.1 | 8.72e-280 | 1 | 383 | 1 | 383 |
| ART06506.1 | 8.72e-280 | 1 | 383 | 1 | 383 |
| AQL14562.1 | 8.72e-280 | 1 | 383 | 1 | 383 |
| QET27646.1 | 8.72e-280 | 1 | 383 | 1 | 383 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 5W8N_A | 9.27e-251 | 1 | 382 | 1 | 382 | LipidA Disaccharide Synthase (LpxB)-6 solubilizing mutations [Escherichia coli BL21(DE3)] |
| 5W8S_A | 7.61e-250 | 1 | 382 | 1 | 382 | LipidA Disaccharide Synthase (LpxB)-7 solubilizing mutations [Escherichia coli BL21(DE3)],5W8X_A Lipid A Disaccharide Synthase (LpxB)-7 solubilizing mutations-Bound to UDP [Escherichia coli BL21(DE3)] |
| 7TGH_T1 | 5.67e-08 | 8 | 365 | 17 | 448 | ChainT1, Lipid-A-disaccharide synthase [Tetrahymena thermophila] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| B5Y1I9 | 7.10e-280 | 1 | 383 | 1 | 383 | Lipid-A-disaccharide synthase OS=Klebsiella pneumoniae (strain 342) OX=507522 GN=lpxB PE=3 SV=1 |
| A6T4Y4 | 1.13e-276 | 1 | 383 | 1 | 383 | Lipid-A-disaccharide synthase OS=Klebsiella pneumoniae subsp. pneumoniae (strain ATCC 700721 / MGH 78578) OX=272620 GN=lpxB PE=3 SV=1 |
| B6HZF6 | 1.00e-256 | 1 | 382 | 1 | 382 | Lipid-A-disaccharide synthase OS=Escherichia coli (strain SE11) OX=409438 GN=lpxB PE=3 SV=1 |
| B7LGP4 | 1.00e-256 | 1 | 382 | 1 | 382 | Lipid-A-disaccharide synthase OS=Escherichia coli (strain 55989 / EAEC) OX=585055 GN=lpxB PE=3 SV=1 |
| B7M1Y5 | 1.42e-256 | 1 | 382 | 1 | 382 | Lipid-A-disaccharide synthase OS=Escherichia coli O8 (strain IAI1) OX=585034 GN=lpxB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000058 | 0.000004 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |