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CAZyme Information: MGYG000002511_05019
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Klebsiella variicola | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Klebsiella; Klebsiella variicola | |||||||||||
| CAZyme ID | MGYG000002511_05019 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 5855; End: 6334 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH23 | 33 | 149 | 1.5e-17 | 0.837037037037037 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| PRK13722 | PRK13722 | 4.46e-72 | 1 | 149 | 1 | 149 | lytic transglycosylase; Provisional |
| cd13400 | LT_IagB-like | 3.66e-42 | 30 | 142 | 1 | 107 | Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda. |
| PRK15328 | PRK15328 | 7.37e-34 | 1 | 146 | 1 | 143 | type III secretion system invasion protein IagB. |
| pfam01464 | SLT | 1.37e-20 | 23 | 141 | 1 | 114 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
| COG0741 | MltE | 3.43e-13 | 26 | 120 | 146 | 240 | Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) [Cell wall/membrane/envelope biogenesis]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AIE03880.1 | 5.87e-114 | 1 | 159 | 1 | 159 |
| AUV56099.1 | 1.68e-113 | 1 | 159 | 1 | 159 |
| CDR98268.1 | 2.39e-113 | 1 | 158 | 1 | 158 |
| QLT91630.1 | 9.75e-113 | 1 | 158 | 1 | 158 |
| AQL24043.1 | 1.97e-112 | 1 | 158 | 1 | 158 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4XP8_A | 2.08e-17 | 21 | 105 | 2 | 87 | Structureof EtgA D60N mutant [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P14499 | 3.14e-71 | 1 | 149 | 1 | 149 | X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1 |
| P47737 | 4.46e-71 | 1 | 149 | 1 | 149 | X polypeptide OS=Escherichia coli (strain K12) OX=83333 GN=yubQ PE=3 SV=1 |
| P17738 | 2.57e-70 | 1 | 149 | 1 | 149 | X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1 |
| Q00739 | 1.04e-69 | 1 | 149 | 1 | 149 | X polypeptide OS=Escherichia coli OX=562 GN=X PE=3 SV=1 |
| E1WAC2 | 6.06e-24 | 5 | 146 | 6 | 143 | Invasion protein IagB OS=Salmonella typhimurium (strain SL1344) OX=216597 GN=iagB PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000758 | 0.997697 | 0.000762 | 0.000287 | 0.000247 | 0.000239 |