logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002536_00723

You are here: Home > Sequence: MGYG000002536_00723

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Plesiomonas shigelloides
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Plesiomonas; Plesiomonas shigelloides
CAZyme ID MGYG000002536_00723
CAZy Family AA10
CAZyme Description GlcNAc-binding protein A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
539 58142.79 5.3139
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002536 3653255 Isolate not provided not provided
Gene Location Start: 78870;  End: 80489  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002536_00723.

CAZyme Signature Domains help

Family Start End Evalue family coverage
AA10 40 236 2.2e-46 0.9887640449438202

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3397 COG3397 2.57e-61 21 337 12 303
Predicted carbohydrate-binding protein, contains CBM5 and CBM33 domains [General function prediction only].
cd21177 LPMO_AA10 1.41e-58 40 237 1 180
lytic polysaccharide monooxygenase (LPMO) auxiliary activity family 10 (AA10). AA10 proteins are copper-dependent lytic polysaccharide monooxygenases (LPMOs), which may act on chitin or cellulose. The family used to be called CBM33. Activities in this family include lytic cellulose monooxygenase (C1-hydroxylating) (EC 1.14.99.54), lytic cellulose monooxygenase (C4-dehydrogenating) (EC 1.14.99.56), lytic chitin monooxygenase (EC 1.14.99.53), and lytic xylan monooxygenase/xylan oxidase (glycosidic bond-cleaving) (EC 1.14.99.-). Also included are viral chitin-binding glycoproteins such as fusolin and spheroidin-like proteins.
cd21178 Fusolin-like 1.33e-55 40 238 1 227
fusolin and similar proteins. Fusolin is a protein found in spindles of insect poxviruses that resembles the lytic polysaccharide monooxygenases of chitinovorous bacteria and may function to disrupt the chitin-rich peritrophic matrix that protects insects against oral infections. Thus, it is a component of the virus occlusion bodies (which are large proteinaceous polyhedra) that protect the virus from the outside environment for extended periods until they are ingested by insect larvae.
PHA03387 gp37 9.62e-52 30 238 10 250
spherodin-like protein; Provisional
pfam03067 LPMO_10 3.90e-51 40 236 1 186
Lytic polysaccharide mono-oxygenase, cellulose-degrading. This domain is found associated with a wide variety of cellulose binding domains. This is a family of two very closely related proteins that together act as both a C1- and a C4-oxidising lytic polysaccharide mono-oxygenase, degrading cellulose. This domain is also found in baculoviral spheroidins and spindolins, protein of unknown function.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SBT61385.1 0.0 1 499 1 499
QOH78690.1 0.0 16 499 1 484
QUJ69169.1 1.87e-144 33 486 4 365
QSV14487.1 7.68e-131 31 486 18 392
QTD51705.1 3.65e-127 28 486 23 490

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4YN1_A 2.67e-30 40 238 1 233
THEATOMIC STRUCTURE OF ANOMALA CUPREA ENTOMOPOXVIRUS (ACEPV) FUSOLIN SPINDLES [Anomala cuprea entomopoxvirus]
4YN2_A 5.53e-30 40 238 1 230
THEATOMIC STRUCTURE OF WISEANA SPP ENTOMOPOXVIRUS (WSEPV) FUSOLIN SPINDLES [unidentified entomopoxvirus]
4X27_A 7.35e-29 40 238 1 233
Structuralbasis for the enhancement of virulence by entomopoxvirus fusolin and its in vivo crystallization into viral spindles (complex with Copper) [Entomopoxvirinae],4X29_A Structural basis for the enhancement of virulence by entomopoxvirus fusolin and its in vivo crystallization into viral spindles (complex with Zinc) [Entomopoxvirinae]
4OW5_A 7.47e-29 40 238 1 233
Structuralbasis for the enhancement of virulence by entomopoxvirus fusolin and its in vivo crystallization into viral spindles [unidentified entomopoxvirus]
4OY7_A 4.65e-19 40 240 1 195
Structureof cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_B Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_C Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_D Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_E Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_F Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_G Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)],4OY7_H Structure of cellulose active LPMO CelS2 (ScLPMO10C) in complex with Copper. [Streptomyces coelicolor A3(2)]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q02I11 1.02e-36 23 347 9 314
Chitin-binding protein CbpD OS=Pseudomonas aeruginosa (strain UCBPP-PA14) OX=208963 GN=cpbD PE=1 SV=1
Q9I589 1.31e-35 23 347 9 314
Chitin-binding protein CbpD OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=cbpD PE=1 SV=1
P23061 1.21e-30 39 238 20 254
Spindolin OS=Choristoneura biennis entomopoxvirus OX=10288 GN=SPH PE=1 SV=1
Q05894 3.35e-29 38 238 19 253
Spindolin OS=Heliothis armigera entomopoxvirus OX=10290 PE=1 SV=1
P23058 6.21e-29 39 238 19 249
Spheroidin-like protein OS=Autographa californica nuclear polyhedrosis virus OX=46015 GN=SLP PE=2 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.042135 0.956498 0.000463 0.000396 0.000242 0.000225

TMHMM  Annotations      download full data without filtering help

start end
21 43