Species | Kocuria rhizophila | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|---|
Lineage | Bacteria; Actinobacteriota; Actinomycetia; Actinomycetales; Micrococcaceae; Kocuria; Kocuria rhizophila | |||||||||||
CAZyme ID | MGYG000002537_02082 | |||||||||||
CAZy Family | GT39 | |||||||||||
CAZyme Description | putative dolichyl-phosphate-mannose--protein mannosyltransferase | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 15090; End: 16724 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GT39 | 46 | 306 | 5.2e-72 | 0.9865470852017937 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
COG1928 | PMT1 | 5.47e-17 | 20 | 276 | 3 | 246 | Dolichyl-phosphate-mannose--protein O-mannosyl transferase [Posttranslational modification, protein turnover, chaperones]. |
pfam16192 | PMT_4TMC | 6.02e-12 | 334 | 541 | 1 | 198 | C-terminal four TMM region of protein-O-mannosyltransferase. PMT_4TMC is the C-terminal four membrane-pass region of protein-O-mannosyltransferases and similar enzymes. |
pfam02366 | PMT | 3.15e-06 | 45 | 188 | 2 | 138 | Dolichyl-phosphate-mannose-protein mannosyltransferase. This is a family of Dolichyl-phosphate-mannose-protein mannosyltransferase proteins EC:2.4.1.109. These proteins are responsible for O-linked glycosylation of proteins, they catalyze the reaction:- Dolichyl phosphate D-mannose + protein <=> dolichyl phosphate + O-D-mannosyl-protein. Also in this family is Drosophila rotated abdomen protein which is a putative mannosyltransferase. This family appears to be distantly related to pfam02516 (A Bateman pers. obs.). This family also contains sequences from ArnTs (4-amino-4-deoxy-L-arabinose lipid A transferase). They catalyze the addition of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of the lipopolysaccharide. This is a critical modification enabling bacteria (e.g. Escherichia coli and Salmonella typhimurium) to resist killing by antimicrobial peptides such as polymyxins. Members such as undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase are predicted to have 12 trans-membrane regions. The N-terminal portion of these proteins is hypothesized to have a conserved glycosylation activity which is shared between distantly related oligosaccharyltransferases ArnT and PglB families. |
PRK13279 | arnT | 6.34e-06 | 113 | 170 | 63 | 119 | lipid IV(A) 4-amino-4-deoxy-L-arabinosyltransferase. |
COG4346 | COG4346 | 1.23e-04 | 112 | 222 | 136 | 236 | Predicted membrane-bound dolichyl-phosphate-mannose-protein mannosyltransferase [Posttranslational modification, protein turnover, chaperones]. |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
QTK31020.1 | 0.0 | 4 | 544 | 1 | 541 |
QMS56647.1 | 0.0 | 1 | 544 | 1 | 544 |
BAG30091.1 | 0.0 | 2 | 544 | 24 | 566 |
VEH74640.1 | 0.0 | 2 | 544 | 19 | 561 |
AVJ53410.1 | 0.0 | 4 | 544 | 1 | 541 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
L8F4Z2 | 5.00e-79 | 40 | 463 | 38 | 454 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycolicibacterium smegmatis (strain MKD8) OX=1214915 GN=pmt PE=3 SV=1 |
P9WN04 | 3.82e-75 | 40 | 543 | 44 | 521 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain CDC 1551 / Oshkosh) OX=83331 GN=pmt PE=3 SV=2 |
P9WN05 | 3.82e-75 | 40 | 543 | 44 | 521 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Mycobacterium tuberculosis (strain ATCC 25618 / H37Rv) OX=83332 GN=pmt PE=1 SV=2 |
Q8NRZ6 | 1.18e-63 | 9 | 543 | 1 | 519 | Probable dolichyl-phosphate-mannose--protein mannosyltransferase OS=Corynebacterium glutamicum (strain ATCC 13032 / DSM 20300 / BCRC 11384 / JCM 1318 / LMG 3730 / NCIMB 10025) OX=196627 GN=pmt PE=3 SV=1 |
Q9C100 | 6.57e-09 | 41 | 281 | 60 | 285 | Dolichyl-phosphate-mannose--protein mannosyltransferase 2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ogm2 PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
0.999956 | 0.000054 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
start | end |
---|---|
36 | 58 |
133 | 155 |
184 | 203 |
224 | 243 |
248 | 265 |
286 | 308 |
400 | 417 |
424 | 441 |
446 | 468 |
507 | 529 |
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