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CAZyme Information: MGYG000002542_01958

You are here: Home > Sequence: MGYG000002542_01958

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Lentilactobacillus parafarraginis
Lineage Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lentilactobacillus; Lentilactobacillus parafarraginis
CAZyme ID MGYG000002542_01958
CAZy Family GH30
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
523 57895.93 5.2113
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002542 2852137 Isolate not provided not provided
Gene Location Start: 15557;  End: 17128  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002542_01958.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH30 40 480 1.3e-246 0.995475113122172

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5520 XynC 4.28e-36 81 451 66 397
O-Glycosyl hydrolase [Cell wall/membrane/envelope biogenesis].
pfam02055 Glyco_hydro_30 2.17e-25 81 376 27 315
Glycosyl hydrolase family 30 TIM-barrel domain.
pfam17189 Glyco_hydro_30C 7.00e-06 413 481 1 63
Glycosyl hydrolase family 30 beta sandwich domain.
pfam02057 Glyco_hydro_59 2.67e-05 75 303 21 198
Glycosyl hydrolase family 59.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
VEF58178.1 0.0 3 523 2 525
AGP72739.1 0.0 3 523 2 525
AGP69913.1 0.0 3 523 2 525
QFV11353.1 0.0 3 523 2 525
CAR88888.1 0.0 3 523 2 525

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
5NGK_A 5.90e-40 33 467 58 486
Theendo-beta1,6-glucanase BT3312 [Bacteroides thetaiotaomicron],5NGK_B The endo-beta1,6-glucanase BT3312 [Bacteroides thetaiotaomicron],5NGK_C The endo-beta1,6-glucanase BT3312 [Bacteroides thetaiotaomicron],5NGL_A The endo-beta1,6-glucanase BT3312 [Bacteroides thetaiotaomicron],5NGL_B The endo-beta1,6-glucanase BT3312 [Bacteroides thetaiotaomicron],5NGL_C The endo-beta1,6-glucanase BT3312 [Bacteroides thetaiotaomicron]
2WNW_A 9.93e-36 44 481 34 440
Thecrystal structure of SrfJ from salmonella typhimurium [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2],2WNW_B The crystal structure of SrfJ from salmonella typhimurium [Salmonella enterica subsp. enterica serovar Typhimurium str. LT2]
7NCX_AAA 2.77e-06 44 478 12 422
ChainAAA, GH30 family xylanase [Thermothelomyces thermophilus ATCC 42464]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q4WBR2 2.72e-43 45 461 62 465
Endo-1,6-beta-D-glucanase neg1 OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=neg1 PE=1 SV=1
Q8J0I9 2.34e-36 53 468 76 485
Endo-1,6-beta-D-glucanase BGN16.3 OS=Trichoderma harzianum OX=5544 PE=1 SV=1
Q7M4T0 2.51e-35 31 442 44 433
Endo-1,6-beta-D-glucanase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=neg-1 PE=1 SV=2
P17439 4.53e-28 39 480 81 509
Lysosomal acid glucosylceramidase OS=Mus musculus OX=10090 GN=Gba PE=1 SV=1
G5ECR8 1.18e-27 44 415 93 455
Putative glucosylceramidase 3 OS=Caenorhabditis elegans OX=6239 GN=gba-3 PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.998957 0.001008 0.000029 0.000008 0.000003 0.000009

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002542_01958.