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CAZyme Information: MGYG000002543_01118
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Campylobacter_B ureolyticus | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Campylobacterota; Campylobacteria; Campylobacterales; Campylobacteraceae; Campylobacter_B; Campylobacter_B ureolyticus | |||||||||||
| CAZyme ID | MGYG000002543_01118 | |||||||||||
| CAZy Family | GH23 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 20565; End: 21002 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH23 | 31 | 136 | 3.2e-18 | 0.8222222222222222 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| cd13400 | LT_IagB-like | 1.25e-37 | 31 | 135 | 2 | 109 | Escherichia coli invasion protein IagB and similar proteins. Lytic transglycosylase-like protein, similar to Escherichia coli invasion protein IagB. IagB is encoded within a pathogenicity island in Salmonella enterica and has been shown to degrade polymeric peptidoglycan. IagB-like invasion proteins are implicated in the invasion of eukaryotic host cells by bacteria. Lytic transglycosylase (LT) catalyzes the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Members of this family resemble the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda. |
| PRK15328 | PRK15328 | 6.83e-24 | 17 | 130 | 16 | 130 | type III secretion system invasion protein IagB. |
| pfam01464 | SLT | 2.06e-15 | 23 | 118 | 1 | 94 | Transglycosylase SLT domain. This family is distantly related to pfam00062. Members are found in phages, type II, type III and type IV secretion systems. |
| cd00254 | LT-like | 4.17e-12 | 34 | 118 | 1 | 80 | lytic transglycosylase(LT)-like domain. Members include the soluble and insoluble membrane-bound LTs in bacteria and LTs in bacteriophage lambda. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. |
| cd13401 | Slt70-like | 6.87e-12 | 22 | 118 | 9 | 106 | 70kDa soluble lytic transglycosylase (Slt70) and similar proteins. Catalytic domain of the 70kda soluble lytic transglycosylase (LT)-like proteins, which also have an N-terminal U-shaped U-domain and a linker L-domain. LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue. Proteins similar to this family include the soluble and insoluble membrane-bound LTs in bacteria and the LTs in bacteriophage lambda. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AGJ76555.1 | 3.12e-100 | 1 | 145 | 1 | 145 |
| ABS52262.1 | 1.27e-99 | 1 | 145 | 1 | 145 |
| QEZ90321.1 | 9.87e-42 | 3 | 137 | 2 | 136 |
| QMS69452.1 | 8.40e-38 | 17 | 138 | 19 | 140 |
| CBH51819.1 | 1.47e-37 | 17 | 138 | 38 | 159 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4XP8_A | 2.22e-09 | 27 | 99 | 8 | 82 | Structureof EtgA D60N mutant [Escherichia coli] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P43018 | 2.22e-16 | 13 | 117 | 12 | 117 | Invasion protein IagB OS=Salmonella typhi OX=90370 GN=iagB PE=3 SV=1 |
| E1WAC2 | 3.13e-16 | 13 | 117 | 12 | 117 | Invasion protein IagB OS=Salmonella typhimurium (strain SL1344) OX=216597 GN=iagB PE=3 SV=1 |
| P0CL15 | 3.13e-16 | 13 | 117 | 12 | 117 | Invasion protein IagB OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=iagB PE=3 SV=1 |
| Q07568 | 3.36e-13 | 25 | 117 | 23 | 116 | Protein IpgF OS=Shigella flexneri OX=623 GN=ipgF PE=3 SV=1 |
| Q55287 | 1.31e-12 | 25 | 117 | 23 | 116 | Protein IpgF OS=Shigella sonnei OX=624 GN=ipgF PE=3 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.002391 | 0.993887 | 0.002937 | 0.000243 | 0.000249 | 0.000254 |