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CAZyme Information: MGYG000002548_01384

You are here: Home > Sequence: MGYG000002548_01384

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Staphylococcus argenteus
Lineage Bacteria; Firmicutes; Bacilli; Staphylococcales; Staphylococcaceae; Staphylococcus; Staphylococcus argenteus
CAZyme ID MGYG000002548_01384
CAZy Family GT2
CAZyme Description Putative glycosyltransferase TagX
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
355 MGYG000002548_12|CGC1 41337.83 6.5755
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002548 2783391 Isolate China Asia
Gene Location Start: 47479;  End: 48546  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002548_01384.

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd00761 Glyco_tranf_GTA_type 6.71e-14 5 121 1 114
Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold. Glycosyltransferases (GTs) are enzymes that synthesize oligosaccharides, polysaccharides, and glycoconjugates by transferring the sugar moiety from an activated nucleotide-sugar donor to an acceptor molecule, which may be a growing oligosaccharide, a lipid, or a protein. Based on the stereochemistry of the donor and acceptor molecules, GTs are classified as either retaining or inverting enzymes. To date, all GT structures adopt one of two possible folds, termed GT-A fold and GT-B fold. This hierarchy includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. The majority of the proteins in this superfamily are Glycosyltransferase family 2 (GT-2) proteins. But it also includes families GT-43, GT-6, GT-8, GT13 and GT-7; which are evolutionarily related to GT-2 and share structure similarities.
pfam00535 Glycos_transf_2 8.75e-11 4 167 1 162
Glycosyl transferase family 2. Diverse family, transferring sugar from UDP-glucose, UDP-N-acetyl- galactosamine, GDP-mannose or CDP-abequose, to a range of substrates including cellulose, dolichol phosphate and teichoic acids.
cd02525 Succinoglycan_BP_ExoA 9.38e-11 2 90 1 100
ExoA is involved in the biosynthesis of succinoglycan. Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.
cd04179 DPM_DPG-synthase_like 7.64e-10 5 125 1 119
DPM_DPG-synthase_like is a member of the Glycosyltransferase 2 superfamily. DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi, and animals, have no transmembrane region, suggesting the existence of adapter molecules for membrane anchoring. This family also includes bacteria and archaea DPM1_like enzymes. However, the enzyme structure and mechanism of function are not well understood. The UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate. This protein family belongs to Glycosyltransferase 2 superfamily.
COG0463 WcaA 7.28e-09 1 286 3 276
Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ATZ86514.1 5.41e-253 1 355 1 355
BBD85451.1 5.41e-253 1 355 1 355
ATY56272.1 5.41e-253 1 355 1 355
BBN30398.1 5.41e-253 1 355 1 355
QDZ04225.1 8.24e-248 1 355 1 355

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q7A711 9.53e-176 1 353 1 353
Putative glycosyltransferase TagX OS=Staphylococcus aureus (strain N315) OX=158879 GN=tagX PE=1 SV=2
Q99VX6 9.53e-176 1 353 1 353
Putative glycosyltransferase TagX OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=tagX PE=3 SV=2
Q6GBJ0 3.87e-175 1 353 1 353
Putative glycosyltransferase TagX OS=Staphylococcus aureus (strain MSSA476) OX=282459 GN=tagX PE=3 SV=1
Q6GJ30 3.87e-175 1 353 1 353
Putative glycosyltransferase TagX OS=Staphylococcus aureus (strain MRSA252) OX=282458 GN=tagX PE=3 SV=1
Q8NXS4 3.87e-175 1 353 1 353
Putative glycosyltransferase TagX OS=Staphylococcus aureus (strain MW2) OX=196620 GN=tagX PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000091 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002548_01384.