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CAZyme Information: MGYG000002549_00219

You are here: Home > Sequence: MGYG000002549_00219

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Bacteroides caccae
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; Bacteroides caccae
CAZyme ID MGYG000002549_00219
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
506 MGYG000002549_1|CGC4 56115.76 6.8696
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002549 5479119 Isolate United States North America
Gene Location Start: 271239;  End: 272759  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002549_00219.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 104 291 7.6e-79 0.9890710382513661

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 9.70e-10 63 301 48 287
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 1.84e-05 114 283 13 175
Amb_all domain.
pfam18884 TSP3_bac 2.52e-04 454 475 1 22
Bacterial TSP3 repeat. This entry contains a novel bacterial thrombospondin type 3 repeat which differs from the typical consensus by containing a glutamate in place of one of the calcium binding aspartate residues.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUU07660.1 0.0 1 506 1 506
QQT77708.1 0.0 1 506 1 506
ASM65744.1 0.0 1 506 1 506
QRP57048.1 0.0 1 506 1 506
QIU94498.1 0.0 1 505 1 491

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B8NQQ7 1.48e-48 50 498 20 414
Probable pectate lyase C OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyC PE=3 SV=1
B0XMA2 2.10e-48 50 498 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain CEA10 / CBS 144.89 / FGSC A1163) OX=451804 GN=plyC PE=3 SV=1
Q4WL88 2.92e-48 50 498 21 415
Probable pectate lyase C OS=Neosartorya fumigata (strain ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100) OX=330879 GN=plyC PE=3 SV=1
A1DPF0 5.65e-48 50 498 21 415
Probable pectate lyase C OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=plyC PE=3 SV=1
Q5B297 5.77e-48 50 498 20 411
Probable pectate lyase C OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) OX=227321 GN=plyC PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000407 0.998869 0.000200 0.000167 0.000157 0.000153

TMHMM  Annotations      download full data without filtering help

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