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CAZyme Information: MGYG000002551_01469

You are here: Home > Sequence: MGYG000002551_01469

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Haemophilus_A paraphrohaemolyticus
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterales; Pasteurellaceae; Haemophilus_A; Haemophilus_A paraphrohaemolyticus
CAZyme ID MGYG000002551_01469
CAZy Family GT25
CAZyme Description Lipooligosaccharide biosynthesis protein lex-1
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
262 MGYG000002551_118|CGC1 30180.12 9.4669
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002551 1748237 MAG China Asia
Gene Location Start: 668;  End: 1456  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002551_01469.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT25 5 175 1.1e-35 0.9723756906077348

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam01755 Glyco_transf_25 8.86e-43 5 169 2 192
Glycosyltransferase family 25 (LPS biosynthesis protein). Members of this family belong to Glycosyltransferase family 25 This is a family of glycosyltransferases involved in lipopolysaccharide (LPS) biosynthesis. These enzymes catalyze the transfer of various sugars onto the growing LPS chain during its biosynthesis.
cd06532 Glyco_transf_25 5.49e-32 6 97 1 97
Glycosyltransferase family 25 [lipooligosaccharide (LOS) biosynthesis protein] is a family of glycosyltransferases involved in LOS biosynthesis. The members include the beta(1,4) galactosyltransferases: Lgt2 of Moraxella catarrhalis, LgtB and LgtE of Neisseria gonorrhoeae and Lic2A of Haemophilus influenzae. M. catarrhalis Lgt2 catalyzes the addition of galactose (Gal) to the growing chain of LOS on the cell surface. N. gonorrhoeae LgtB and LgtE link Gal-beta(1,4) to GlcNAc (N-acetylglucosamine) and Glc (glucose), respectively. The genes encoding LgtB and LgtE are two genes of a five gene locus involved in the synthesis of gonococcal LOS. LgtE is believed to perform the first step in LOS biosynthesis.
COG3306 COG3306 1.42e-30 4 262 2 253
Glycosyltransferase involved in LPS biosynthesis, GR25 family [Cell wall/membrane/envelope biogenesis].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SNV77258.1 2.26e-94 5 261 3 251
QLB16086.1 1.02e-90 6 262 2 253
AHG75252.1 6.76e-89 6 262 2 253
AHG77378.1 9.59e-89 6 262 2 253
AWW34437.1 9.59e-89 6 262 2 253

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q05770 4.84e-72 6 262 2 263
Lipooligosaccharide biosynthesis protein LpsA OS=Mannheimia haemolytica OX=75985 GN=lpsA PE=3 SV=2
Q57125 3.16e-58 5 262 32 282
Putative glycosyltransferase HI_0765 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) OX=71421 GN=HI_0765 PE=3 SV=1
Q57394 6.26e-33 7 207 4 210
Lipooligosaccharide biosynthesis protein lic2B OS=Haemophilus influenzae OX=727 GN=lic2B PE=3 SV=1
Q50950 3.74e-30 7 217 3 224
Lacto-N-neotetraose biosynthesis glycosyltransferase LgtE OS=Neisseria gonorrhoeae OX=485 GN=lgtE PE=3 SV=1
Q51116 4.70e-30 7 201 3 208
Lacto-N-neotetraose biosynthesis glycosyltransferase LgtB OS=Neisseria meningitidis serogroup B (strain MC58) OX=122586 GN=lgtB PE=3 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000047 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002551_01469.