logo
sublogo
You are browsing environment: HUMAN GUT
help

CAZyme Information: MGYG000002562_00831

You are here: Home > Sequence: MGYG000002562_00831

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Dialister sp900557365
Lineage Bacteria; Firmicutes_C; Negativicutes; Veillonellales; Dialisteraceae; Dialister; Dialister sp900557365
CAZyme ID MGYG000002562_00831
CAZy Family GT9
CAZyme Description ADP-heptose--LPS heptosyltransferase 2
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
360 MGYG000002562_3|CGC2 40226.43 9.0831
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002562 1679141 MAG China Asia
Gene Location Start: 129539;  End: 130621  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002562_00831.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT9 84 313 8.3e-38 0.8844444444444445

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd03789 GT9_LPS_heptosyltransferase 1.88e-41 16 349 1 274
lipopolysaccharide heptosyltransferase and similar proteins. Lipopolysaccharide heptosyltransferase (2.4.99.B6) is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family also contains lipopolysaccharide 1,2-N-acetylglucosaminetransferase EC 2.4.1.56 and belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
COG0859 RfaF 2.02e-36 15 349 2 325
ADP-heptose:LPS heptosyltransferase [Cell wall/membrane/envelope biogenesis].
pfam01075 Glyco_transf_9 2.24e-19 84 330 2 242
Glycosyltransferase family 9 (heptosyltransferase). Members of this family belong to glycosyltransferase family 9. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. All of these enzymes transfer heptose to the lipopolysaccharide core.
PRK10422 PRK10422 4.13e-15 11 357 2 346
lipopolysaccharide core biosynthesis protein; Provisional
PRK10916 PRK10916 6.90e-07 196 314 184 305
ADP-heptose--LPS heptosyltransferase RfaF.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
BBK25206.1 8.16e-176 8 357 6 354
AXL20515.1 4.91e-88 10 354 2 342
ALG42175.1 7.35e-85 10 354 2 342
AVO27634.1 7.35e-85 10 354 2 342
CCC73399.1 7.35e-85 10 354 2 342

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3TOV_A 9.72e-72 8 354 2 345
Thecrystal structure of the glycosyl transferase family 9 from Veillonella parvula DSM 2008 [Veillonella parvula DSM 2008],3TOV_B The crystal structure of the glycosyl transferase family 9 from Veillonella parvula DSM 2008 [Veillonella parvula DSM 2008]

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.999187 0.000832 0.000003 0.000001 0.000001 0.000001

TMHMM  Annotations      download full data without filtering help

start end
17 39