Species | Romboutsia timonensis | |||||||||||
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Lineage | Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Romboutsia; Romboutsia timonensis | |||||||||||
CAZyme ID | MGYG000002563_01180 | |||||||||||
CAZy Family | GH18 | |||||||||||
CAZyme Description | Peroxiredoxin | |||||||||||
CAZyme Property |
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Genome Property |
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Gene Location | Start: 709; End: 2475 Strand: - |
Family | Start | End | Evalue | family coverage |
---|---|---|---|---|
GH18 | 268 | 570 | 9.2e-62 | 0.8918918918918919 |
Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
---|---|---|---|---|---|---|---|
PRK13189 | PRK13189 | 9.58e-114 | 2 | 212 | 6 | 218 | peroxiredoxin; Provisional |
cd03016 | PRX_1cys | 1.31e-111 | 7 | 214 | 1 | 203 | Peroxiredoxin (PRX) family, 1-cys PRX subfamily; composed of PRXs containing only one conserved cysteine, which serves as the peroxidatic cysteine. They are homodimeric thiol-specific antioxidant (TSA) proteins that confer a protective role in cells by reducing and detoxifying hydrogen peroxide, peroxynitrite, and organic hydroperoxides. As with all other PRXs, a cysteine sulfenic acid intermediate is formed upon reaction of 1-cys PRX with its substrates. Having no resolving cysteine, the oxidized enzyme is resolved by an external small-molecule or protein reductant such as thioredoxin or glutaredoxin. Similar to typical 2-cys PRX, 1-cys PRX forms a functional dimeric unit with a B-type interface, as well as a decameric structure which is stabilized in the reduced form of the enzyme. Other oligomeric forms, tetramers and hexamers, have also been reported. Mammalian 1-cys PRX is localized cellularly in the cytosol and is expressed at high levels in brain, eye, testes and lung. The seed-specific plant 1-cys PRXs protect tissues from reactive oxygen species during desiccation and are also called rehydrins. |
cd06548 | GH18_chitinase | 2.62e-95 | 267 | 558 | 18 | 322 | The GH18 (glycosyl hydrolases, family 18) type II chitinases hydrolyze chitin, an abundant polymer of N-acetylglucosamine and have been identified in bacteria, fungi, insects, plants, viruses, and protozoan parasites. The structure of this domain is an eight-stranded alpha/beta barrel with a pronounced active-site cleft at the C-terminal end of the beta-barrel. |
COG0450 | AhpC | 8.87e-79 | 7 | 192 | 5 | 194 | Alkyl hydroperoxide reductase subunit AhpC (peroxiredoxin) [Defense mechanisms]. |
PRK13190 | PRK13190 | 1.76e-78 | 7 | 213 | 4 | 201 | putative peroxiredoxin; Provisional |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
---|---|---|---|---|---|
CED94343.1 | 0.0 | 1 | 588 | 1 | 588 |
CEI73471.1 | 0.0 | 1 | 586 | 1 | 585 |
AXU31260.1 | 0.0 | 1 | 588 | 1 | 709 |
AXU27459.1 | 0.0 | 1 | 588 | 1 | 709 |
AXU35048.1 | 0.0 | 1 | 588 | 1 | 709 |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
6TSB_AAA | 3.48e-193 | 231 | 588 | 10 | 367 | ChainAAA, Peroxiredoxin [Clostridioides difficile 630] |
6T9M_AAA | 6.92e-193 | 231 | 588 | 29 | 386 | ChainAAA, Peroxiredoxin [Clostridioides difficile 630] |
5OVQ_D | 3.81e-77 | 1 | 211 | 3 | 218 | CrystalStructure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF [Aquifex aeolicus VF5],5OVQ_F Crystal Structure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF [Aquifex aeolicus VF5],5OVQ_G Crystal Structure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF [Aquifex aeolicus VF5],5OVQ_H Crystal Structure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF [Aquifex aeolicus VF5],5OVQ_I Crystal Structure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF [Aquifex aeolicus VF5],5OVQ_J Crystal Structure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF [Aquifex aeolicus VF5],5OVQ_L Crystal Structure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF [Aquifex aeolicus VF5] |
5OVQ_A | 3.94e-77 | 1 | 211 | 3 | 218 | CrystalStructure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF [Aquifex aeolicus VF5],5OVQ_B Crystal Structure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF [Aquifex aeolicus VF5],5OVQ_C Crystal Structure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF [Aquifex aeolicus VF5],5OVQ_E Crystal Structure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF [Aquifex aeolicus VF5],5OVQ_K Crystal Structure of the peroxiredoxin (AhpC2) from the Hyperthermophilic bacteria Aquifex aeolicus VF [Aquifex aeolicus VF5] |
6Q5V_A | 8.69e-63 | 4 | 193 | 6 | 199 | 1-CysSiPrx, a Prx6-family 1-Cys peroxiredoxin of the thermoacidophilic archaeon Sulfolobus islandicus [Sulfolobus islandicus REY15A],6Q5V_B 1-Cys SiPrx, a Prx6-family 1-Cys peroxiredoxin of the thermoacidophilic archaeon Sulfolobus islandicus [Sulfolobus islandicus REY15A],6Q5V_C 1-Cys SiPrx, a Prx6-family 1-Cys peroxiredoxin of the thermoacidophilic archaeon Sulfolobus islandicus [Sulfolobus islandicus REY15A],6Q5V_D 1-Cys SiPrx, a Prx6-family 1-Cys peroxiredoxin of the thermoacidophilic archaeon Sulfolobus islandicus [Sulfolobus islandicus REY15A],6Q5V_E 1-Cys SiPrx, a Prx6-family 1-Cys peroxiredoxin of the thermoacidophilic archaeon Sulfolobus islandicus [Sulfolobus islandicus REY15A],6Q5V_F 1-Cys SiPrx, a Prx6-family 1-Cys peroxiredoxin of the thermoacidophilic archaeon Sulfolobus islandicus [Sulfolobus islandicus REY15A],6Q5V_G 1-Cys SiPrx, a Prx6-family 1-Cys peroxiredoxin of the thermoacidophilic archaeon Sulfolobus islandicus [Sulfolobus islandicus REY15A],6Q5V_H 1-Cys SiPrx, a Prx6-family 1-Cys peroxiredoxin of the thermoacidophilic archaeon Sulfolobus islandicus [Sulfolobus islandicus REY15A],6Q5V_I 1-Cys SiPrx, a Prx6-family 1-Cys peroxiredoxin of the thermoacidophilic archaeon Sulfolobus islandicus [Sulfolobus islandicus REY15A],6Q5V_J 1-Cys SiPrx, a Prx6-family 1-Cys peroxiredoxin of the thermoacidophilic archaeon Sulfolobus islandicus [Sulfolobus islandicus REY15A] |
Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
---|---|---|---|---|---|---|
Q8R844 | 4.28e-99 | 4 | 212 | 14 | 218 | Peroxiredoxin 2 OS=Caldanaerobacter subterraneus subsp. tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) OX=273068 GN=TTE2186 PE=3 SV=1 |
O67024 | 6.85e-78 | 1 | 211 | 3 | 218 | Peroxiredoxin OS=Aquifex aeolicus (strain VF5) OX=224324 GN=aq_858 PE=1 SV=1 |
Q8PYP6 | 5.85e-66 | 4 | 215 | 1 | 216 | Peroxiredoxin OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) OX=192952 GN=MM_0814 PE=3 SV=1 |
Q979N7 | 5.25e-65 | 7 | 213 | 5 | 202 | Peroxiredoxin OS=Thermoplasma volcanium (strain ATCC 51530 / DSM 4299 / JCM 9571 / NBRC 15438 / GSS1) OX=273116 GN=TV1123 PE=3 SV=1 |
Q96XS5 | 5.70e-63 | 4 | 195 | 6 | 201 | Peroxiredoxin 2 OS=Sulfurisphaera tokodaii (strain DSM 16993 / JCM 10545 / NBRC 100140 / 7) OX=273063 GN=STK_24420 PE=3 SV=1 |
Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
---|---|---|---|---|---|
1.000048 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |
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