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CAZyme Information: MGYG000002563_02259
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Romboutsia timonensis | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Peptostreptococcales; Peptostreptococcaceae; Romboutsia; Romboutsia timonensis | |||||||||||
| CAZyme ID | MGYG000002563_02259 | |||||||||||
| CAZy Family | CBM51 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 856; End: 6612 Strand: - | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM51 | 1763 | 1904 | 6.1e-46 | 0.9925373134328358 |
| CBM51 | 1539 | 1676 | 4e-39 | 0.9776119402985075 |
| CBM51 | 1318 | 1453 | 2.8e-34 | 0.9850746268656716 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam08305 | NPCBM | 5.85e-53 | 1761 | 1904 | 1 | 135 | NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) |
| smart00776 | NPCBM | 8.83e-45 | 1763 | 1904 | 5 | 144 | This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. |
| pfam08305 | NPCBM | 2.32e-44 | 1536 | 1677 | 1 | 135 | NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) |
| pfam08305 | NPCBM | 1.06e-40 | 1315 | 1454 | 1 | 136 | NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) |
| smart00776 | NPCBM | 6.41e-39 | 1535 | 1677 | 2 | 144 | This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QJS19250.1 | 0.0 | 1 | 1910 | 1 | 1974 |
| AQW26342.1 | 0.0 | 3 | 1911 | 2 | 1893 |
| AQM59432.1 | 0.0 | 1 | 1913 | 1 | 2197 |
| ABG84962.1 | 0.0 | 3 | 1911 | 2 | 1893 |
| AMN32462.1 | 0.0 | 3 | 1911 | 2 | 1893 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7JFS_A | 1.70e-169 | 280 | 1236 | 27 | 981 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 7JS4_A | 5.30e-156 | 752 | 1680 | 49 | 978 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 7JND_A | 1.52e-98 | 31 | 457 | 29 | 449 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124],7JNF_A Chain A, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 7JNB_A | 3.31e-97 | 31 | 457 | 29 | 449 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 5KDJ_A | 1.46e-86 | 662 | 1314 | 24 | 672 | ZmpBmetallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124],5KDJ_B ZmpB metallopeptidase from Clostridium perfringens [Clostridium perfringens ATCC 13124] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q6RUF5 | 5.04e-08 | 1764 | 1915 | 43 | 213 | Blood-group-substance endo-1,4-beta-galactosidase OS=Clostridium perfringens OX=1502 GN=eabC PE=1 SV=1 |
| P56957 | 1.25e-06 | 1484 | 1778 | 288 | 593 | Pesticidal crystal protein Cry22Aa OS=Bacillus thuringiensis OX=1428 GN=cry22Aa PE=2 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000295 | 0.999021 | 0.000170 | 0.000189 | 0.000163 | 0.000144 |