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CAZyme Information: MGYG000002570_00511

You are here: Home > Sequence: MGYG000002570_00511

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_E sp003526955
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Ruminococcus_E; Ruminococcus_E sp003526955
CAZyme ID MGYG000002570_00511
CAZy Family CBM74
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
737 MGYG000002570_11|CGC1 80062.25 4.2874
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002570 2026568 MAG China Asia
Gene Location Start: 17909;  End: 20122  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002570_00511.

CAZyme Signature Domains help

Family Start End Evalue family coverage
CBM74 241 567 4.4e-131 0.9967948717948718

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam16738 CBM26 1.12e-10 37 93 1 59
Starch-binding module 26. CBM26 is a carbohydrate-binding module that binds starch.
cd14256 Dockerin_I 1.88e-08 675 737 1 57
Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex.
pfam00404 Dockerin_1 2.82e-06 676 736 1 55
Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium.
PRK14081 PRK14081 0.001 585 650 293 360
triple tyrosine motif-containing protein; Provisional
cd14254 Dockerin_II 0.001 676 733 1 50
Type II dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type II dockerins, which are responsible for mediating attachment of the cellulosome complex to the bacterial cell wall.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QCT06902.1 0.0 1 696 1 693
CDM67953.1 3.87e-105 46 673 583 1190
AWX97480.1 2.17e-80 37 698 554 1185
AWX95531.1 2.17e-80 37 698 554 1185
QCT07491.1 8.56e-67 26 571 25 528

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000926 0.998125 0.000241 0.000293 0.000210 0.000186

TMHMM  Annotations      download full data without filtering help

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