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CAZyme Information: MGYG000002575_00377

You are here: Home > Sequence: MGYG000002575_00377

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; ;
CAZyme ID MGYG000002575_00377
CAZy Family GH105
CAZyme Description Unsaturated rhamnogalacturonyl hydrolase YesR
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
395 MGYG000002575_18|CGC1 45548.26 8.723
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002575 2444047 MAG China Asia
Gene Location Start: 8205;  End: 9392  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002575_00377.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH105 71 392 2e-88 0.9789156626506024

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam07470 Glyco_hydro_88 1.31e-102 56 393 1 342
Glycosyl Hydrolase Family 88. Unsaturated glucuronyl hydrolase catalyzes the hydrolytic release of unsaturated glucuronic acids from oligosaccharides (EC:3.2.1.-) produced by the reactions of polysaccharide lyases.
COG4225 YesR 1.34e-60 42 361 5 314
Rhamnogalacturonyl hydrolase YesR [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QIU93222.1 4.35e-183 24 395 1 370
QGT72377.1 1.76e-182 24 395 1 370
QDH53356.1 1.67e-180 33 395 11 370
QUT26116.1 1.67e-180 33 395 11 370
QDM10174.1 1.67e-180 33 395 11 370

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
4CE7_A 1.51e-73 41 393 17 369
Crystalstructure of a novel unsaturated beta-glucuronyl hydrolase enzyme, belonging to family GH105, involved in ulvan degradation [Nonlabens ulvanivorans],4CE7_B Crystal structure of a novel unsaturated beta-glucuronyl hydrolase enzyme, belonging to family GH105, involved in ulvan degradation [Nonlabens ulvanivorans],4CE7_C Crystal structure of a novel unsaturated beta-glucuronyl hydrolase enzyme, belonging to family GH105, involved in ulvan degradation [Nonlabens ulvanivorans]
5NOA_A 7.36e-67 37 389 17 370
PolysaccharideLyase BACCELL_00875 [Bacteroides thetaiotaomicron]
4Q88_A 7.36e-56 47 395 10 359
ChainA, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482],4Q88_B Chain B, Uncharacterized protein [Phocaeicola vulgatus ATCC 8482]
1NC5_A 7.99e-13 127 390 88 364
Structureof Protein of Unknown Function of YteR from Bacillus Subtilis [Bacillus subtilis],2D8L_A Crystal Structure of Unsaturated Rhamnogalacturonyl Hydrolase in complex with dGlcA-GalNAc [Bacillus subtilis]
2GH4_A 3.26e-12 127 390 78 354
ChainA, Putative glycosyl hydrolase yteR [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
T2KPL9 2.31e-74 33 395 14 377
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Formosa agariphila (strain DSM 15362 / KCTC 12365 / LMG 23005 / KMM 3901 / M-2Alg 35-1) OX=1347342 GN=BN863_22220 PE=2 SV=1
L7P9J4 1.01e-72 41 393 24 376
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Nonlabens ulvanivorans OX=906888 GN=IL45_01505 PE=1 SV=1
P9WF04 8.48e-71 54 390 58 408
Unsaturated 3S-rhamnoglycuronyl hydrolase OS=Alteromonas sp. (strain LOR) OX=1537994 GN=LOR_28 PE=1 SV=1
O34559 4.38e-12 127 390 88 364
Unsaturated rhamnogalacturonyl hydrolase YteR OS=Bacillus subtilis (strain 168) OX=224308 GN=yteR PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.093235 0.900693 0.005260 0.000320 0.000236 0.000254

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002575_00377.