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CAZyme Information: MGYG000002602_01856
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | CAG-274 sp900545305 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; CAG-274; CAG-274; CAG-274 sp900545305 | |||||||||||
| CAZyme ID | MGYG000002602_01856 | |||||||||||
| CAZy Family | CBM51 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 46701; End: 51212 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| CBM51 | 470 | 619 | 6.4e-22 | 0.9850746268656716 |
| CBM32 | 1298 | 1420 | 4.7e-17 | 0.9032258064516129 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| pfam08305 | NPCBM | 1.39e-29 | 468 | 620 | 2 | 136 | NPCBM/NEW2 domain. This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. This domain has also been called the NEW2 domain (Naumoff DG. Phylogenetic analysis of alpha-galactosidases of the GH27 family. Molecular Biology (Engl Transl). (2004)38:388-399.) |
| smart00776 | NPCBM | 2.60e-18 | 470 | 619 | 6 | 144 | This novel putative carbohydrate binding module (NPCBM) domain is found at the N-terminus of glycosyl hydrolase family 98 proteins. |
| pfam00754 | F5_F8_type_C | 1.55e-14 | 1298 | 1421 | 5 | 127 | F5/8 type C domain. This domain is also known as the discoidin (DS) domain family. |
| cd14256 | Dockerin_I | 1.26e-13 | 1431 | 1484 | 3 | 56 | Type I dockerin repeat domain. Bacterial cohesin domains bind to a complementary protein domain named dockerin, and this interaction is required for the formation of the cellulosome, a cellulose-degrading complex. The cellulosome consists of scaffoldin, a noncatalytic scaffolding polypeptide, that comprises repeating cohesion modules and a single carbohydrate-binding module (CBM). Specific calcium-dependent interactions between cohesins and dockerins appear to be essential for cellulosome assembly. This subfamily represents type I dockerins, which are responsible for anchoring a variety of enzymatic domains to the complex. |
| pfam00404 | Dockerin_1 | 1.23e-11 | 1431 | 1484 | 2 | 55 | Dockerin type I repeat. The dockerin repeat is the binding partner of the cohesin domain pfam00963. The cohesin-dockerin interaction is the crucial interaction for complex formation in the cellulosome. The dockerin repeats, each bearing homology to the EF-hand calcium-binding loop bind calcium. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| AMN35280.1 | 2.77e-197 | 433 | 1437 | 5 | 994 |
| AQW23377.1 | 4.12e-196 | 433 | 1437 | 5 | 994 |
| ATD49073.1 | 4.76e-196 | 433 | 1437 | 10 | 999 |
| SQF04750.1 | 9.84e-143 | 460 | 1427 | 134 | 1102 |
| QTZ28728.1 | 1.36e-142 | 389 | 1427 | 73 | 1100 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 7JND_A | 1.62e-22 | 27 | 200 | 39 | 209 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124],7JNF_A Chain A, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 7JNB_A | 2.89e-22 | 27 | 200 | 39 | 209 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 7JFS_A | 1.79e-21 | 65 | 200 | 54 | 191 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
| 2V72_A | 9.59e-14 | 1307 | 1423 | 29 | 143 | Thestructure of the family 32 CBM from C. perfringens NanJ in complex with galactose [Clostridium perfringens] |
| 7JS4_A | 8.52e-12 | 470 | 618 | 613 | 751 | ChainA, F5/8 type C domain protein [Clostridium perfringens ATCC 13124] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P0DTR4 | 2.45e-09 | 1307 | 1422 | 530 | 644 | A type blood N-acetyl-alpha-D-galactosamine deacetylase OS=Flavonifractor plautii OX=292800 PE=1 SV=1 |
| I1S2N3 | 2.98e-09 | 1299 | 1423 | 61 | 188 | Galactose oxidase OS=Gibberella zeae (strain ATCC MYA-4620 / CBS 123657 / FGSC 9075 / NRRL 31084 / PH-1) OX=229533 GN=GAOA PE=3 SV=1 |
| P0CS93 | 2.98e-09 | 1299 | 1423 | 61 | 188 | Galactose oxidase OS=Gibberella zeae OX=5518 GN=GAOA PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.000264 | 0.998977 | 0.000203 | 0.000188 | 0.000169 | 0.000152 |