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CAZyme Information: MGYG000002643_00663

You are here: Home > Sequence: MGYG000002643_00663

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Turicimonas sp900542195
Lineage Bacteria; Proteobacteria; Gammaproteobacteria; Burkholderiales; Burkholderiaceae; Turicimonas; Turicimonas sp900542195
CAZyme ID MGYG000002643_00663
CAZy Family GT8
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
646 MGYG000002643_7|CGC1 76735.02 9.1618
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002643 2740903 MAG China Asia
Gene Location Start: 4474;  End: 6414  Strand: +

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002643_00663.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GT8 314 576 3.8e-49 0.8832684824902723

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
cd04194 GT8_A4GalT_like 5.96e-56 318 576 3 248
A4GalT_like proteins catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The members of this family of glycosyltransferases catalyze the addition of galactose or glucose residues to the lipooligosaccharide (LOS) or lipopolysaccharide (LPS) of the bacterial cell surface. The enzymes exhibit broad substrate specificities. The known functions found in this family include: Alpha-1,4-galactosyltransferase, LOS-alpha-1,3-D-galactosyltransferase, UDP-glucose:(galactosyl) LPS alpha1,2-glucosyltransferase, UDP-galactose: (glucosyl) LPS alpha1,2-galactosyltransferase, and UDP-glucose:(glucosyl) LPS alpha1,2-glucosyltransferase. Alpha-1,4-galactosyltransferase from N. meningitidis adds an alpha-galactose from UDP-Gal (the donor) to a terminal lactose (the acceptor) of the LOS structure of outer membrane. LOSs are virulence factors that enable the organism to evade the immune system of host cells. In E. coli, the three alpha-1,2-glycosyltransferases, that are involved in the synthesis of the outer core region of the LPS, are all members of this family. The three enzymes share 40 % of sequence identity, but have different sugar donor or acceptor specificities, representing the structural diversity of LPS.
pfam11380 Stealth_CR2 1.05e-43 37 140 1 106
Stealth protein CR2, conserved region 2. Stealth_CR2 is the second of several highly conserved regions on stealth proteins in metazoa and bacteria. There are up to four CR regions on all member proteins. CR2 carries a well-conserved NDD sequence-motif. The domain is found in tandem with CR1, CR3 and CR4 on both potential metazoan hosts and pathogenic eubacterial species that are capsular polysaccharide phosphotransferases. The CR domains appear on eukaryotic proteins such as GNPTAB, N-acetylglucosamine-1-phosphotransferase subunits alpha/beta. Horizontal gene-transfer seems to have occurred between host and bacteria of these sequence-regions in order for the bacteria to evade detection by the host innate immune system.
pfam01501 Glyco_transf_8 5.74e-37 317 576 1 250
Glycosyl transferase family 8. This family includes enzymes that transfer sugar residues to donor molecules. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. This family includes Lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, and glycogenin glucosyltransferase.
COG1442 RfaJ 6.46e-30 314 598 1 269
Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis].
cd00505 Glyco_transf_8 1.49e-17 319 575 5 245
Members of glycosyltransferase family 8 (GT-8) are involved in lipopolysaccharide biosynthesis and glycogen synthesis. Members of this family are involved in lipopolysaccharide biosynthesis and glycogen synthesis. GT-8 comprises enzymes with a number of known activities: lipopolysaccharide galactosyltransferase, lipopolysaccharide glucosyltransferase 1, glycogenin glucosyltransferase, and N-acetylglucosaminyltransferase. GT-8 enzymes contains a conserved DXD motif which is essential in the coordination of a catalytic divalent cation, most commonly Mn2+.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AMK14500.1 6.02e-52 306 612 21 323
QIM10714.1 1.47e-47 6 375 3 378
ASQ29972.1 2.31e-41 293 599 293 606
AXL32980.1 1.26e-40 301 599 279 574
ASN92820.1 2.26e-40 301 599 279 574

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
6U4B_A 2.85e-26 306 584 294 576
ChainA, WbbM protein [Klebsiella pneumoniae]
7DXI_A 1.72e-21 6 149 15 159
ChainA, FI02838p [Drosophila melanogaster],7DXI_B Chain B, FI02838p [Drosophila melanogaster]
7S05_A 2.06e-21 2 155 256 413
ChainA, N-acetylglucosamine-1-phosphotransferase subunits alpha/beta [Homo sapiens],7S05_B Chain B, N-acetylglucosamine-1-phosphotransferase subunits alpha/beta [Homo sapiens],7S06_A Chain A, N-acetylglucosamine-1-phosphotransferase subunits alpha/beta [Homo sapiens],7S06_B Chain B, N-acetylglucosamine-1-phosphotransferase subunits alpha/beta [Homo sapiens]
1SS9_A 2.07e-18 318 575 3 253
ChainA, alpha-1,4-galactosyl transferase [Neisseria meningitidis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q714U9 1.56e-41 6 279 61 350
Capsular polysaccharide phosphotransferase fcs1 OS=Haemophilus influenzae OX=727 GN=fcs1 PE=3 SV=1
Q84BK9 3.98e-38 3 294 54 360
Capsular polysaccharide phosphotransferase LcbA OS=Aeromonas hydrophila OX=644 GN=lcbA PE=3 SV=1
Q848R7 1.01e-36 3 294 54 360
Capsular polysaccharide phosphotransferase LcbA OS=Aeromonas hydrophila OX=644 GN=lcbA PE=3 SV=1
Q51151 5.16e-35 1 292 57 368
Capsular polysaccharide phosphotransferase OS=Neisseria meningitidis serogroup B OX=491 PE=3 SV=1
Q8KSB4 8.04e-35 1 220 60 289
Capsular polysaccharide phosphotransferase cps1A OS=Actinobacillus pleuropneumoniae OX=715 GN=cps1A PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000067 0.000000 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002643_00663.