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CAZyme Information: MGYG000002758_00037
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | ||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Monoglobales_A; UBA1381; ; | |||||||||||
| CAZyme ID | MGYG000002758_00037 | |||||||||||
| CAZy Family | GH28 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 5216; End: 7318 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH28 | 88 | 426 | 2.3e-34 | 0.8984615384615384 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG5434 | Pgu1 | 4.41e-12 | 84 | 297 | 135 | 367 | Polygalacturonase [Carbohydrate transport and metabolism]. |
| pfam00295 | Glyco_hydro_28 | 2.06e-05 | 173 | 327 | 84 | 237 | Glycosyl hydrolases family 28. Glycosyl hydrolase family 28 includes polygalacturonase EC:3.2.1.15 as well as rhamnogalacturonase A(RGase A), EC:3.2.1.-. These enzymes are important in cell wall metabolism. |
| PLN03010 | PLN03010 | 1.74e-04 | 179 | 249 | 162 | 234 | polygalacturonase |
| PLN02793 | PLN02793 | 8.49e-04 | 182 | 245 | 185 | 250 | Probable polygalacturonase |
| PLN03003 | PLN03003 | 0.002 | 126 | 249 | 102 | 215 | Probable polygalacturonase At3g15720 |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| BCJ93866.1 | 1.44e-175 | 5 | 700 | 7 | 716 |
| BCJ98361.1 | 4.06e-168 | 2 | 699 | 4 | 715 |
| SDS06655.1 | 2.48e-49 | 2 | 423 | 56 | 485 |
| ALJ04708.1 | 6.69e-49 | 4 | 356 | 61 | 434 |
| APA66227.1 | 1.79e-48 | 40 | 423 | 89 | 472 |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| Q7M1E7 | 6.06e-06 | 124 | 257 | 155 | 267 | Polygalacturonase OS=Chamaecyparis obtusa OX=13415 PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as OTHER
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 1.000043 | 0.000000 | 0.000000 | 0.000000 | 0.000000 | 0.000000 |