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CAZyme Information: MGYG000002788_00794

You are here: Home > Sequence: MGYG000002788_00794

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species UMGS1004 sp900548845
Lineage Bacteria; Firmicutes_A; Clostridia_A; Christensenellales; Borkfalkiaceae; UMGS1004; UMGS1004 sp900548845
CAZyme ID MGYG000002788_00794
CAZy Family GH78
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
682 77323.96 4.9221
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002788 1418375 MAG United States North America
Gene Location Start: 1687;  End: 3735  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002788_00794.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH78 340 669 4.8e-38 0.6388888888888888

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam17389 Bac_rhamnosid6H 1.52e-10 345 668 14 336
Bacterial alpha-L-rhamnosidase 6 hairpin glycosidase domain. This family consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria.
COG3408 GDB1 5.63e-05 436 592 342 509
Glycogen debranching enzyme (alpha-1,6-glucosidase) [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
AJY74261.1 3.40e-166 12 668 32 720
QGY42778.1 6.60e-158 11 664 51 735
QNK54884.1 1.04e-154 4 664 16 706
BBD46135.1 5.89e-154 11 664 60 744
QTH41646.1 5.54e-153 30 664 1 662

PDB Hits      help

has no PDB hit.

Swiss-Prot Hits      help

has no Swissprot hit.

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000070 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002788_00794.