dbCAN-seq: a database of CAZyme sequence and annotation

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CAZyme Information: MGYG000002789_01666

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Basic Information help

Species

Lapidilactobacillus dextrinicus

Lineage

Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lapidilactobacillus; Lapidilactobacillus dextrinicus

CAZyme ID

MGYG000002789_01666

CAZy Family

GH23

CAZyme Description

hypothetical protein

CAZyme Property

Protein Length	CGC	Molecular Weight	Isoelectric Point
1822		193136.64	10.0433

Genome Property

Genome Assembly ID	Genome Size	Genome Type	Country	Continent
MGYG000002789	1826765	MAG	United States	North America

Gene Location

Start: 32574; End: 38042 Strand: +

Full Sequence Download help

Enzyme Prediction help

No EC number prediction in MGYG000002789_01666.

CDD Domains download full data without filtering help

Cdd ID	Domain	E-Value	qStart	qEnd	sStart	sEnd	Domain Description
cd13402	LT_TF-like	1.57e-33	1599	1715	1	117	lytic transglycosylase-like domain of tail fiber-like proteins and similar domains. These tail fiber-like proteins are multi-domain proteins that include a lytic transglycosylase (LT) domain. Members of the LT family include the soluble and insoluble membrane-bound LTs in bacteria, the LTs in bacteriophage lambda, and the eukaryotic "goose-type" lysozymes (goose egg-white lysozyme; GEWL). LTs catalyze the cleavage of the beta-1,4-glycosidic bond between N-acetylmuramic acid (MurNAc) and N-acetyl-D-glucosamine (GlcNAc), as do "goose-type" lysozymes. However, in addition to this, they also make a new glycosidic bond with the C6 hydroxyl group of the same muramic acid residue.
COG3953	SLT	1.27e-29	1592	1767	8	197	SLT domain protein [Mobilome: prophages, transposons].
COG5283	COG5283	3.65e-13	179	1599	35	1213	Phage-related tail protein [Mobilome: prophages, transposons].
pfam00529	HlyD	0.002	139	292	54	196	HlyD membrane-fusion protein of T1SS. HlyD is a component of the prototypical alpha-haemolysin (HlyA) bacterial type I secretion system, along with the other components HlyB and TolC. HlyD and HlyB are inner-membrane proteins and specific components of the transport apparatus of alpha-haemolysin. HlyD is anchored in the cytoplasmic membrane by a single transmembrane domain and has a large periplasmic domain within the carboxy-terminal 100 amino acids, HlyB and HlyD form a stable complex that binds the recombinant protein bearing a C-terminal HlyA signal sequence and ATP in the cytoplasm. HlyD, HlyB and TolC combine to form the three-component ABC transporter complex that forms a trans-membrane channel or pore through which HlyA can be transferred directly to the extracellular medium. Cutinase has been shown to be transported effectively through this pore.
PHA01351	PHA01351	0.003	626	828	8	203	putative minor structural protein

CAZyme Hits help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End
QVQ49110.1	1.26e-250	85	1820	82	1696
AXQ27002.1	3.22e-241	4	1818	1	1939
AJO74698.1	1.21e-240	4	1818	1	1939
AOB19739.1	1.23e-239	4	1818	1	1939
AOB23399.1	1.23e-239	4	1818	1	1939

PDB Hits help

has no PDB hit.

Swiss-Prot Hits download full data without filtering help

Hit ID	E-Value	Query Start	Query End	Hit Start	Hit End	Description
P45931	3.13e-13	1576	1790	1346	1556	Uncharacterized protein YqbO OS=Bacillus subtilis (strain 168) OX=224308 GN=yqbO PE=1 SV=2
P54334	1.30e-11	1573	1745	1091	1262	Phage-like element PBSX protein XkdO OS=Bacillus subtilis (strain 168) OX=224308 GN=xkdO PE=4 SV=2

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other	SP_Sec_SPI	LIPO_Sec_SPII	TAT_Tat_SPI	TATLIP_Sec_SPII	PILIN_Sec_SPIII
1.000055	0.000000	0.000000	0.000000	0.000000	0.000000

TMHMM Annotations download full data without filtering help

start	end
361	383
404	426