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CAZyme Information: MGYG000002807_00040

You are here: Home > Sequence: MGYG000002807_00040

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Eubacterium_R sp900539165
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Acutalibacteraceae; Eubacterium_R; Eubacterium_R sp900539165
CAZyme ID MGYG000002807_00040
CAZy Family GH110
CAZyme Description Alpha-1,3-galactosidase A
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
555 63767.74 8.6219
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002807 1764558 MAG Peru South America
Gene Location Start: 33981;  End: 35648  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002807_00040.

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH110 15 542 3e-120 0.9124087591240876

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG5434 Pgu1 0.001 218 315 223 314
Polygalacturonase [Carbohydrate transport and metabolism].

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
SLK20623.1 1.54e-114 19 554 21 577
ATD55583.1 1.77e-114 19 554 26 582
ATD56740.1 1.77e-114 19 554 26 582
QBJ75880.1 1.87e-114 19 554 28 584
QHQ59531.1 1.66e-108 7 538 14 558

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
7JW4_A 5.56e-32 31 541 62 567
Crystalstructure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta],7JW4_B Crystal structure of PdGH110B in complex with D-galactose [Pseudoalteromonas distincta]
7JWF_A 2.46e-31 31 541 62 567
Crystalstructure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_B Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_C Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta],7JWF_D Crystal structure of PdGH110B D344N in complex with alpha-(1,3)-galactobiose [Pseudoalteromonas distincta]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
Q8A2Z5 1.18e-58 4 539 23 531
Alpha-1,3-galactosidase A OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=glaA PE=3 SV=1
Q826C5 8.67e-57 23 538 68 581
Alpha-1,3-galactosidase A OS=Streptomyces avermitilis (strain ATCC 31267 / DSM 46492 / JCM 5070 / NBRC 14893 / NCIMB 12804 / NRRL 8165 / MA-4680) OX=227882 GN=glaA PE=3 SV=1
Q5L7M8 1.64e-56 31 517 60 527
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / CCUG 4856 / JCM 11019 / NCTC 9343 / Onslow) OX=272559 GN=glaA PE=3 SV=1
Q64MU6 3.07e-55 31 517 60 527
Alpha-1,3-galactosidase A OS=Bacteroides fragilis (strain YCH46) OX=295405 GN=glaA PE=3 SV=1
B1V8K7 2.46e-54 5 541 45 585
Alpha-1,3-galactosidase A OS=Streptacidiphilus griseoplanus OX=66896 GN=glaA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as OTHER

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
1.000060 0.000001 0.000000 0.000000 0.000000 0.000000

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002807_00040.