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CAZyme Information: MGYG000002845_00663
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Basic Information |
Genomic context |
Full Sequence |
Enzyme annotations |
CAZy signature domains |
CDD domains |
CAZyme hits |
PDB hits |
Swiss-Prot hits |
SignalP and Lipop annotations |
TMHMM annotations
Basic Information help
| Species | Lachnoclostridium_B sp900543315 | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| Lineage | Bacteria; Firmicutes_A; Clostridia; Lachnospirales; Lachnospiraceae; Lachnoclostridium_B; Lachnoclostridium_B sp900543315 | |||||||||||
| CAZyme ID | MGYG000002845_00663 | |||||||||||
| CAZy Family | GH73 | |||||||||||
| CAZyme Description | hypothetical protein | |||||||||||
| CAZyme Property |
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| Genome Property |
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| Gene Location | Start: 50411; End: 53002 Strand: + | |||||||||||
CAZyme Signature Domains help
| Family | Start | End | Evalue | family coverage |
|---|---|---|---|---|
| GH73 | 327 | 440 | 6.3e-19 | 0.9453125 |
CDD Domains download full data without filtering help
| Cdd ID | Domain | E-Value | qStart | qEnd | sStart | sEnd | Domain Description |
|---|---|---|---|---|---|---|---|
| COG4193 | LytD | 3.57e-20 | 274 | 451 | 53 | 238 | Beta- N-acetylglucosaminidase [Carbohydrate transport and metabolism]. |
| COG5492 | YjdB | 5.65e-17 | 717 | 857 | 28 | 169 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
| pfam07538 | ChW | 8.35e-17 | 616 | 650 | 1 | 35 | Clostridial hydrophobic W. A novel extracellular macromolecular system has been proposed based on the proteins containing ChW repeats. ChW stands for Clostridial hydrophobic with conserved W (tryptophan). This repeat was originally described in Clostridium acetobutylicum but is also found in other Gram-positive bacteria including Enterococcus faecalis, Streptococcus agalactiae and Streptomyces coelicolor. |
| pfam07538 | ChW | 8.83e-16 | 766 | 800 | 1 | 35 | Clostridial hydrophobic W. A novel extracellular macromolecular system has been proposed based on the proteins containing ChW repeats. ChW stands for Clostridial hydrophobic with conserved W (tryptophan). This repeat was originally described in Clostridium acetobutylicum but is also found in other Gram-positive bacteria including Enterococcus faecalis, Streptococcus agalactiae and Streptomyces coelicolor. |
| COG5492 | YjdB | 7.12e-15 | 564 | 698 | 25 | 160 | Uncharacterized conserved protein YjdB, contains Ig-like domain [General function prediction only]. |
CAZyme Hits help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End |
|---|---|---|---|---|---|
| QEK17141.1 | 3.07e-150 | 87 | 569 | 35 | 510 |
| AWY97555.1 | 1.99e-130 | 101 | 600 | 48 | 541 |
| QPS13527.1 | 1.54e-112 | 104 | 547 | 76 | 513 |
| QMW73215.1 | 1.54e-112 | 104 | 547 | 76 | 513 |
| QOV20091.1 | 6.62e-112 | 99 | 547 | 40 | 477 |
PDB Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| 4Q2W_A | 1.29e-28 | 183 | 449 | 59 | 290 | CrystalStructure of pneumococcal peptidoglycan hydrolase LytB [Streptococcus pneumoniae TIGR4] |
Swiss-Prot Hits download full data without filtering help
| Hit ID | E-Value | Query Start | Query End | Hit Start | Hit End | Description |
|---|---|---|---|---|---|---|
| P59205 | 1.08e-27 | 183 | 449 | 427 | 658 | Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae serotype 4 (strain ATCC BAA-334 / TIGR4) OX=170187 GN=lytB PE=1 SV=1 |
| P59206 | 1.30e-27 | 183 | 449 | 471 | 702 | Putative endo-beta-N-acetylglucosaminidase OS=Streptococcus pneumoniae (strain ATCC BAA-255 / R6) OX=171101 GN=lytB PE=1 SV=1 |
SignalP and Lipop Annotations help
This protein is predicted as SP
| Other | SP_Sec_SPI | LIPO_Sec_SPII | TAT_Tat_SPI | TATLIP_Sec_SPII | PILIN_Sec_SPIII |
|---|---|---|---|---|---|
| 0.042450 | 0.612130 | 0.343178 | 0.001201 | 0.000604 | 0.000414 |
