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CAZyme Information: MGYG000002877_00354

You are here: Home > Sequence: MGYG000002877_00354

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Prevotella sp900550365
Lineage Bacteria; Bacteroidota; Bacteroidia; Bacteroidales; Bacteroidaceae; Prevotella; Prevotella sp900550365
CAZyme ID MGYG000002877_00354
CAZy Family PL1
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
520 MGYG000002877_4|CGC1 57509.34 5.1384
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002877 2502849 MAG United States North America
Gene Location Start: 11077;  End: 12639  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

No EC number prediction in MGYG000002877_00354.

CAZyme Signature Domains help

Family Start End Evalue family coverage
PL1 131 341 8.8e-42 0.8465346534653465

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
COG3866 PelB 2.29e-45 44 427 33 344
Pectate lyase [Carbohydrate transport and metabolism].
smart00656 Amb_all 9.89e-37 134 342 12 190
Amb_all domain.
366158 pfam00544 5.00e-24 134 338 30 211
Pec_lyase_C Pectate lyase. This enzyme forms a right handed beta helix structure. Pectate lyase is an enzyme involved in the maceration and soft rotting of plant tissue.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
QUT75310.1 5.86e-117 24 430 5 386
QNH62939.1 1.40e-37 49 427 61 378
QHJ07062.1 1.91e-36 65 427 66 369
SCA88301.1 2.79e-32 29 428 23 335
QAT67521.1 2.79e-32 29 428 23 335

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
1VBL_A 1.12e-21 107 427 102 415
Structureof the thermostable pectate lyase PL 47 [Bacillus sp. TS-47]
3ZSC_A 3.83e-21 47 322 8 220
Catalyticfunction and substrate recognition of the pectate lyase from Thermotoga maritima [Thermotoga maritima]
5AMV_A 7.60e-21 166 428 149 399
Structuralinsights into the loss of catalytic competence in pectate lyase at low pH [Bacillus subtilis],5X2I_A Polygalacturonate Lyase by Fusing with a Self-assembling Amphipathic Peptide [Bacillus subtilis subsp. subtilis str. 168]
1BN8_A 9.21e-21 166 428 170 420
BacillusSubtilis Pectate Lyase [Bacillus subtilis]
2BSP_A 2.23e-20 166 428 170 420
ChainA, PROTEIN (PECTATE LYASE) [Bacillus subtilis]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
B1B6T1 5.99e-29 42 428 41 340
Pectate trisaccharide-lyase OS=Bacillus sp. OX=1409 GN=pel PE=1 SV=1
Q65DC2 5.99e-29 42 428 41 340
Pectate trisaccharide-lyase OS=Bacillus licheniformis (strain ATCC 14580 / DSM 13 / JCM 2505 / CCUG 7422 / NBRC 12200 / NCIMB 9375 / NCTC 10341 / NRRL NRS-1264 / Gibson 46) OX=279010 GN=BLi04129 PE=3 SV=1
Q8GCB2 5.99e-29 42 428 41 340
Pectate trisaccharide-lyase OS=Bacillus licheniformis OX=1402 GN=pelA PE=1 SV=1
B8NBC2 9.40e-21 64 340 46 260
Probable pectate lyase B OS=Aspergillus flavus (strain ATCC 200026 / FGSC A1120 / IAM 13836 / NRRL 3357 / JCM 12722 / SRRC 167) OX=332952 GN=plyB PE=3 SV=1
Q2TZY0 9.40e-21 64 340 46 260
Probable pectate lyase B OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40) OX=510516 GN=plyB PE=3 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000524 0.998610 0.000332 0.000174 0.000158 0.000141

TMHMM  Annotations      download full data without filtering help

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