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CAZyme Information: MGYG000002880_01102

You are here: Home > Sequence: MGYG000002880_01102

Basic Information | Genomic context | Full Sequence | Enzyme annotations |  CAZy signature domains |  CDD domains | CAZyme hits | PDB hits | Swiss-Prot hits | SignalP and Lipop annotations | TMHMM annotations

Basic Information help

Species Ruminococcus_D sp900539835
Lineage Bacteria; Firmicutes_A; Clostridia; Oscillospirales; Ruminococcaceae; Ruminococcus_D; Ruminococcus_D sp900539835
CAZyme ID MGYG000002880_01102
CAZy Family GH5
CAZyme Description hypothetical protein
CAZyme Property
Protein Length CGC Molecular Weight Isoelectric Point
2296 249965.77 4.0771
Genome Property
Genome Assembly ID Genome Size Genome Type Country Continent
MGYG000002880 1989530 MAG United States North America
Gene Location Start: 2006;  End: 8896  Strand: -

Full Sequence      Download help

Enzyme Prediction      help

EC 3.2.1.78

CAZyme Signature Domains help

Family Start End Evalue family coverage
GH5 43 298 4.9e-82 0.9881422924901185

CDD Domains      download full data without filtering help

Cdd ID Domain E-Value qStart qEnd sStart sEnd Domain Description
pfam08757 CotH 1.68e-37 647 1018 1 314
CotH kinase protein. Members of this family include the spore coat protein H (cotH). This protein is an atypical protein kinase that phosphorylates CotB and CotG.
pfam00150 Cellulase 3.49e-30 42 295 1 272
Cellulase (glycosyl hydrolase family 5).
pfam18998 Flg_new_2 1.46e-10 1255 1322 1 72
Divergent InlB B-repeat domain. This family of domains are found in bacterial cell surface proteins. They are often found in tandem array. This domain is closely related to pfam09479.
pfam18998 Flg_new_2 1.82e-08 1434 1508 1 74
Divergent InlB B-repeat domain. This family of domains are found in bacterial cell surface proteins. They are often found in tandem array. This domain is closely related to pfam09479.
pfam18998 Flg_new_2 5.48e-06 1176 1247 4 73
Divergent InlB B-repeat domain. This family of domains are found in bacterial cell surface proteins. They are often found in tandem array. This domain is closely related to pfam09479.

CAZyme Hits      help

Hit ID E-Value Query Start Query End Hit Start Hit End
ADU23074.1 4.53e-113 23 339 25 331
CCO04360.1 1.84e-111 30 339 36 335
ADU21877.1 1.65e-110 25 339 31 335
AWV34670.1 7.27e-104 19 338 27 335
AIQ75360.1 1.02e-102 19 338 27 335

PDB Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
3JUG_A 5.01e-100 30 339 21 320
Crystalstructure of endo-beta-1,4-mannanase from the alkaliphilic Bacillus sp. N16-5 [Bacillus sp. N16-5]
1WKY_A 1.94e-97 30 339 6 305
Crystalstructure of alkaline mannanase from Bacillus sp. strain JAMB-602: catalytic domain and its Carbohydrate Binding Module [Bacillus sp. JAMB-602]
2WHJ_A 8.25e-97 32 338 1 297
Understandinghow diverse mannanases recognise heterogeneous substrates [Salipaludibacillus agaradhaerens]
2WHL_A 2.16e-93 33 337 1 293
Understandinghow diverse mannanases recognise heterogeneous substrates [Salipaludibacillus agaradhaerens]
1BQC_A 7.89e-72 31 337 1 301
Beta-MannanaseFrom Thermomonospora Fusca [Thermobifida fusca],2MAN_A Mannotriose Complex Of Thermomonospora Fusca Beta-Mannanase [Thermobifida fusca],3MAN_A Mannohexaose Complex Of Thermomonospora Fusca Beta-mannanase [Thermobifida fusca]

Swiss-Prot Hits      download full data without filtering help

Hit ID E-Value Query Start Query End Hit Start Hit End Description
G1K3N4 4.52e-96 32 338 1 297
Mannan endo-1,4-beta-mannosidase OS=Salipaludibacillus agaradhaerens OX=76935 PE=1 SV=1
P51529 2.38e-73 7 339 13 337
Mannan endo-1,4-beta-mannosidase OS=Streptomyces lividans OX=1916 GN=manA PE=1 SV=2
B3PF24 9.71e-60 17 339 32 347
Mannan endo-1,4-beta-mannosidase OS=Cellvibrio japonicus (strain Ueda107) OX=498211 GN=man5A PE=1 SV=1
P22533 5.33e-45 53 330 55 326
Beta-mannanase/endoglucanase A OS=Caldicellulosiruptor saccharolyticus OX=44001 GN=manA PE=1 SV=2
P22541 2.39e-06 36 269 118 343
Endoglucanase A OS=Butyrivibrio fibrisolvens OX=831 GN=celA PE=1 SV=1

SignalP and Lipop Annotations help

This protein is predicted as SP

Other SP_Sec_SPI LIPO_Sec_SPII TAT_Tat_SPI TATLIP_Sec_SPII PILIN_Sec_SPIII
0.000270 0.999075 0.000170 0.000165 0.000154 0.000137

TMHMM  Annotations      help

There is no transmembrane helices in MGYG000002880_01102.